Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SMURF1'

Total of fusion sequences: 7 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
XM_017012457.1
4..79
100.0%
-
7

XM_006717604.2
80..512
100.0%
+
10
1
0
0
intron-intron
Homo Sapiens 1..413
99.8%
+
7
LOC100421006 332..417
95.9%
+
4
1
0
0
intron-intron
Homo Sapiens 2..46
95.6%
-
1
27..47
100.0%
-
7
1
0
0
intron-intron
Homo Sapiens
NM_020429.2
6..261
96.9%
+
7
LOC388572
XR_002957217.1
163..432
97.9%
-
11
1
0
0
intron-exon
Homo Sapiens
XM_011524951.3
1..474
99.8%
+
17

XM_017012457.1
468..662
100.0%
-
7
1
0
0
intron-intron
Homo Sapiens
XM_017012457.1
1..515
99.1%
+
7
UAP1
Q16222

XM_011509914.2
405..603
96.5%
+
1
1
0
0
intron-intron
Homo Sapiens
NM_013339.3
8..146
100.0%
+
1

XM_017012457.1
147..556
99.8%
-
7
1
0
0
exon-intron

T o p