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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SMG7'

Total of fusion sequences: 11 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
38..68
96.5%
-
1
LOC107986478 49..71
100.0%
-
5
1
0
0
intron-intron
2
Homo Sapiens
LOC110673971
NM_006765.3
1..26
100.0%
+
8

XM_011510206.3
8..347
98.6%
-
1
1
0
0
intron-exon
3
Homo Sapiens

NM_001846.3
10..31
95.5%
-
13

XM_011510205.3
28..405
99.0%
-
1
1
0
0
intron-exon
4
Homo Sapiens
CCDC169-SOHLH2
NM_001198910.1
1..25
100.0%
+
13

XM_011510206.3
18..443
100.0%
-
1
1
0
0
intron-exon
5
Homo Sapiens

XM_017012750.2
11..313
99.1%
-
7

XM_011510205.3
299..508
99.1%
+
1
1
0
0
intron-intron
6
Homo Sapiens

XM_011510206.3
9..113
100.0%
+
1

XM_024450768.1
82..115
96.6%
-
17
1
0
0
exon-intron
7
Homo Sapiens

NM_020792.4
1..26
100.0%
-
3

XM_011510206.3
8..244
96.3%
-
1
1
0
0
intron-exon
8
Homo Sapiens

XM_011510205.3
1..338
97.7%
-
1

XM_011510205.3
335..478
100.0%
+
1
1
0
0
exon-exon
9
Homo Sapiens

XM_011510206.3
12..114
100.0%
+
1
AC025627.1 86..116
96.8%
+
17
1
0
0
exon-intron
10
Homo Sapiens
C5orf30
Q96GV9

NM_033211.3
44..118
100.0%
+
5

XM_011510206.3
111..211
98.4%
-
1
1
0
0
exon-intron

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