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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SMC1A'

Total of fusion sequences: 10 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NM_001281463.1
1..478
96.0%
-
X

XM_006724754.2
474..815
98.9%
+
X
1
0
0
exon-exon
Homo Sapiens
NM_001281463.1
4..23
100.0%
+
X
RPL41P1 24..109
97.7%
-
20
1
0
0
intron-exon
Homo Sapiens
NM_001281463.1
41..64
100.0%
-
X

XM_017006277.2
55..93
96.6%
+
3
1
0
0
intron-intron
Homo Sapiens
NM_001281463.1
1..218
99.6%
-
X

NM_001318120.1
216..397
99.0%
-
4
0
0
2956
exon-exon
Homo Sapiens
NM_001281463.1
1..218
99.6%
-
X

NM_001318120.1
216..659
99.8%
-
4
0
0
2956
exon-exon
Homo Sapiens
XM_017016638.1
1..34
100.0%
+
10

NM_001281463.1
6..96
96.6%
-
X
1
0
0
intron-exon
Homo Sapiens TMEM132C
Q8N3T6

XR_001748922.1
38..59
100.0%
+
12

NM_001281463.1
58..118
100.0%
-
X
1
0
0
intron-exon
Homo Sapiens
XM_024450652.1
14..299
99.0%
+
17

NM_001281463.1
296..578
99.0%
+
X
1
0
0
intron-exon
Homo Sapiens
NM_001281463.1
1..783
98.2%
-
X

NM_012423.3
776..869
95.8%
+
19
1
0
0
exon-exon
Homo Sapiens
XM_006713104.2
1..114
100.0%
+
3

NM_001281463.1
108..273
98.2%
-
X
1
0
0
intron-intron

T o p