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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SMARCB1'

Total of fusion sequences: 21 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
NM_001007468.2
17..154
99.3%
-
22

NM_000607.2
155..377
99.6%
-
9
1
0
0
exon-exon
Homo SapiensSplGraphs
NM_001007468.2
1..334
99.8%
+
22

NM_001007468.2
332..429
100.0%
+
22
7
5
41
exon-exon
Homo Sapiens
NM_001007468.2
2..214
99.6%
-
22

NM_001007468.2
212..571
99.8%
-
22
7
39
1
exon-exon
Homo Sapiens
NM_001007468.2
6..199
97.4%
-
22

NM_001007468.2
197..531
100.0%
-
22
7
15
14
exon-exon
Homo Sapiens
NM_001007468.2
1..196
98.0%
-
22

NM_001007468.2
194..375
100.0%
-
22
0
2
8442
exon-exon
Homo Sapiens
NM_001007468.2
1..177
99.5%
-
22

NM_001007468.2
175..496
100.0%
-
22
7
2
37
exon-exon
Homo Sapiens
NM_001007468.2
12..181
98.3%
-
22

NM_001007468.2
179..526
100.0%
-
22
7
2
5
exon-exon
Homo Sapiens
NM_001007468.2
10..178
99.5%
-
22

NM_001007468.2
176..528
100.0%
-
22
7
2
5
exon-exon
Homo Sapiens
NM_001007468.2
1..1560
99.9%
+
22

XR_001740071.2
1559..1857
99.7%
+
3
1
0
0
exon-exon
Homo Sapiens
NM_001007468.2
50..101
100.0%
-
22

NM_001007468.2
89..726
98.8%
+
22
0
6505
2365
exon-intron

T o p