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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SMARCA5'

Total of fusion sequences: 5 (from 3,500,620 parsed EST/mRNAs. Last update: 2020-05-11 17:25:38)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_053124.2
1..86
100.0%
-
8

XM_006501521.2
78..471
99.3%
-
3
1
0
0
exon-intron
2
Mus musculus

XM_011247228.2
2..21
100.0%
-
19

NM_053124.2
15..572
97.5%
+
8
1
0
0
intron-exon
3
Mus musculus

NM_053124.2
12..638
100.0%
-
8
Yipf5
Q9EQQ2

NM_023311.3
632..653
100.0%
-
18
1
0
0
exon-intron
4
Mus musculus

NM_053124.2
46..754
99.2%
-
8

NM_001080813.2
741..769
100.0%
-
8
1
0
0
exon-intron
5
Mus musculus

NM_053124.2
20..966
99.5%
-
8
Gm26573 947..977
96.9%
+
4
1
0
0
exon-intron

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