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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SMARCA1'

Total of fusion sequences: 5 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NM_003069.4
1..114
99.2%
-
X

NM_001330216.1
107..355
99.6%
+
17
1
0
0
exon-exon
Homo Sapiens
XR_001738608.1
24..46
100.0%
+
2

NM_001282874.1
39..522
98.4%
+
X
1
0
0
intron-exon
Homo Sapiens
NM_003069.4
1..78
100.0%
-
X

NM_003069.4
75..136
98.4%
+
X
1
0
0
exon-exon
Homo Sapiens
NM_001111298.2
13..38
100.0%
-
6

NM_003069.4
29..683
99.6%
+
X
1
0
0
intron-exon
Homo Sapiens
NM_001282874.1
4..35
100.0%
-
X

XM_024449427.1
22..319
99.0%
-
13
1
0
0
intron-exon

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