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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SMAD3'

Total of fusion sequences: 11 (from 3,500,620 parsed EST/mRNAs. Last update 2020-05-11 17:25:38)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XM_011521560.1
1..1359
99.7%
+
15

NM_001145103.1
1359..1677
100.0%
+
15
0
459
2632
intron-intron
2
Homo Sapiens

NM_001145103.1
2..617
99.9%
+
15

NM_001271886.1
617..785
100.0%
-
15
1
0
0
exon-exonBREAKPOINTs
29099951
3
Homo Sapiens

NM_001145103.1
67..366
99.4%
+
15

NM_001145103.1
362..456
99.0%
-
15
0
65535
65535
exon-exon
4
Homo Sapiens

XM_011521560.1
16..144
99.3%
-
15

NM_001145103.1
142..208
100.0%
+
15
0
459
2632
intron-intron
5
Homo Sapiens

XM_017027093.1
101..116
95.2%
-
19

NM_005902.3
116..233
97.1%
+
15
1
0
0
intron-intron
6
Homo Sapiens

XM_011521560.1
20..211
99.0%
+
15

XM_011544632.2
202..329
100.0%
+
8
1
0
0
intron-intron
7
Homo Sapiens

NM_001025159.2
87..165
96.3%
-
5

NM_001145103.1
160..276
97.5%
-
15
1
0
0
exon-exon
8
Homo Sapiens

NM_001145103.1
1..89
100.0%
-
15

XM_011542703.2
83..408
98.5%
-
11
1
0
0
intron-exon
9
Homo Sapiens

NM_001130847.3
1..259
99.3%
-
X

NM_005902.3
252..272
100.0%
+
15
1
0
0
exon-intron
10
Homo Sapiens

NM_001145103.1
59..159
100.0%
-
15

XR_001744845.2
157..316
99.4%
+
7
1
0
0
exon-intron

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