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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SLIT3'

Total of fusion sequences: 13 (from 3,500,620 parsed EST/mRNAs. Last update 2020-05-11 17:25:38)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XM_017009779.1
1..1499
100.0%
-
5

NM_014599.5
1500..3522
100.0%
+
X
2
2
0
exon-exon
2
Homo Sapiens
ChimerDB
XM_017009779.1
1..2634
100.0%
-
5

NM_014599.5
2635..4655
99.8%
+
X
2
2
0
intron-exon
3
Homo Sapiens

XM_011523779.2
9..693
99.6%
+
17

NM_001271946.1
687..710
100.0%
-
5
1
0
0
intron-intron
4
Homo Sapiens

XM_011511102.2
9..230
97.8%
+
2

XM_017009779.1
224..383
99.4%
-
5
1
0
0
intron-intron
5
Homo Sapiens

NM_020639.2
9..75
100.0%
-
21

NM_003062.3
62..77
96.9%
-
5
1
0
0
exon-intron
6
Homo Sapiens
ZNF735
P0CB33

NM_001159524.1
1..37
97.3%
+
7

NM_003062.3
38..439
99.6%
+
5
1
0
0
intron-exon
7
Homo Sapiens

XM_006719290.4
6..125
97.5%
+
12

NM_003062.3
118..259
99.3%
+
5
1
0
0
exon-intron
8
Homo Sapiens

NM_016035.4
8..290
97.9%
+
9

XM_017009779.1
281..306
96.2%
+
5
1
0
0
exon-intron
9
Homo Sapiens

XR_926950.1
1..180
100.0%
-
7

XM_017009779.1
170..189
100.0%
+
5
1
0
0
exon-intron
10
Homo Sapiens

NM_003062.3
1..85
95.7%
+
5

NM_183353.2
9..99
95.2%
+
X
1
0
0
intron-intron

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