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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SLC38A2'

Total of fusion sequences: 16 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_018976.4
1..128
100.0%
-
12

NM_024835.4
124..519
100.0%
+
17
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB TRIM48
Q8IWZ4

NM_024114.3
74..134
100.0%
+
11

NM_018976.4
129..245
99.2%
-
12
1
0
0
exon-exon
3
Homo Sapiens
SplGraphs
NM_006904.6
1..337
100.0%
-
8

NM_018976.4
333..425
100.0%
-
12
1
0
0
intron-exon
4
Homo Sapiens

XM_011535794.1
26..585
100.0%
+
6

NM_018976.4
576..1435
100.0%
-
12
1
0
0
exon-exon
5
Homo Sapiens

NM_018976.4
12..134
99.2%
+
12

NM_018976.4
127..245
99.2%
-
12
0
1148
971
exon-exon
6
Homo Sapiens

NM_018976.4
7..55
96.0%
-
12

NM_018976.4
53..162
100.0%
+
12
0
1148
971
exon-exon
7
Homo Sapiens

NM_018976.4
8..192
100.0%
-
12
CNIH3
Q8TBE1

NR_136294.1
178..212
100.0%
-
1
2
257
0
exon-intron
8
Homo Sapiens

NM_018976.4
8..449
100.0%
-
12
CNIH3
Q8TBE1

NR_136294.1
435..467
100.0%
-
1
2
257
0
exon-intron
9
Homo Sapiens

XM_011535794.1
26..585
100.0%
+
6

NM_018976.4
576..660
95.3%
-
12
1
0
0
exon-exon
10
Homo Sapiens

XR_001747963.2
5..24
100.0%
+
11

NM_018976.4
12..783
99.9%
-
12
1
0
0
intron-exon

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