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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SLC12A9'

Total of fusion sequences: 6 (from 3,500,620 parsed EST/mRNAs. Last update 2020-05-11 17:25:38)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_020246.3
15..436
99.6%
+
7

NM_005228.4
433..510
100.0%
+
7
1
0
0
exon-exon
2
Homo Sapiens

XM_024446840.1
1..545
100.0%
-
7

NM_004444.4
546..4353
100.0%
-
7
0
2691
12
intron-exon
3
Homo Sapiens

NM_001285404.1
1..1141
100.0%
-
3

NM_020246.3
1140..1164
100.0%
-
7
1
0
0
exon-intron
4
Homo Sapiens

NM_004444.4
9..153
98.9%
+
7

XM_024446840.1
154..268
98.9%
+
7
0
2691
12
intron-exon
5
Homo Sapiens

NM_020246.3
1..221
99.6%
+
7

XR_937435.1
222..242
100.0%
-
21
1
0
0
exon-intron
6
Homo Sapiens

XM_011518790.1
1..22
100.0%
+
9

XM_024446839.1
12..123
96.8%
-
7
1
0
0
intron-exon

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