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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SLC12A2'

Total of fusion sequences: 25 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
XR_001742214.1
1..1048
100.0%
+
5

XM_017010065.2
1047..2907
100.0%
-
5
1
0
0
exon-exon
Homo Sapiens
XR_001742214.1
1..1048
100.0%
+
5

XM_017010065.2
1047..2703
100.0%
-
5
1
0
0
exon-exon
Homo Sapiens
XR_001742214.1
8..126
100.0%
-
5

NM_012068.5
125..210
100.0%
-
19
1
0
0
exon-exon
Homo Sapiens
XR_001742214.1
18..117
100.0%
-
5

NM_001160103.1
114..703
99.4%
+
14
1
0
0
exon-exon
Mus musculus
XR_001782352.1
19..541
99.3%
+
18

NM_001322268.1
542..572
100.0%
+
10
1
0
0
exon-intron
Mus musculus
XR_001782352.1
19..465
99.1%
+
18

NM_016897.3
451..832
95.3%
-
14
1
0
0
intron-intron
Homo Sapiens
XR_001742214.1
1..177
100.0%
-
5

NM_024595.2
172..365
100.0%
-
1
1
0
0
exon-exon
Mus musculus
XM_017322244.1
25..68
97.0%
-
7

XR_001782352.1
51..421
97.4%
-
18
1
0
0
intron-exon
Mus musculus
XR_001782352.1
14..344
99.4%
+
18

NM_001001980.2
142..400
95.5%
+
5
1
0
0
exon-intron
Homo Sapiens
XM_017029725.2
5..27
100.0%
+
X

XR_001742214.1
22..181
100.0%
-
5
1
0
0
intron-exon

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