Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SKP1'

Total of fusion sequences: 18 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
11
Homo Sapiens
LOC105372932
XR_922621.2
6..28
100.0%
+
1

NM_170679.2
20..675
99.6%
-
5
1
0
0
intron-exon
12
Homo Sapiens

XM_006724346.2
1..22
100.0%
+
22

NM_170679.2
23..349
99.4%
+
5
1
0
0
intron-exon
13
Homo Sapiens

NM_170679.2
4..97
100.0%
-
5

XM_024452374.1
95..800
96.4%
+
X
1
0
0
exon-exon
14
Homo Sapiens

NM_170679.2
1..297
95.3%
+
5
LOC105370733
XM_017022805.1
209..483
95.3%
+
15
1
0
0
exon-intron
15
Homo Sapiens

NM_170679.2
1..512
100.0%
-
5

XM_011530089.2
509..542
100.0%
-
22
1
0
0
exon-intron
16
Homo Sapiens

NM_000243.2
1..72
96.6%
-
16

NM_170679.2
4..626
99.9%
+
5
1
0
0
intron-intron
17
Homo Sapiens

NM_170679.2
15..894
98.0%
-
5

XM_011520970.2
881..902
100.0%
-
12
1
0
0
exon-intron
18
Homo Sapiens

NM_170679.2
34..72
100.0%
+
5

NM_170679.2
70..578
99.9%
-
5
1
0
0
exon-exon

T o p