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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SKP1'

Total of fusion sequences: 32 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NM_170679.2
2..257
100.0%
-
5

NM_001540.4
257..365
100.0%
+
7
1
0
0
exon-exon
Mus musculusSplGraphs
XM_006532786.2
1..65
100.0%
+
11

XM_006532786.2
57..510
99.4%
+
11
1
0
0
intron-intron
Mus musculus H3f3b
P84244

XM_006532248.2
1..172
96.6%
+
11

XM_006532786.2
160..221
98.4%
+
11
1
0
0
exon-exon
Homo Sapiens
NM_170679.2
1..552
99.3%
+
5

XR_001747813.1
552..573
100.0%
-
11
2
0
355
intron-intron
Homo Sapiens
XR_001747804.1
1..351
99.8%
+
11

NM_170679.2
351..546
100.0%
-
5
2
0
355
intron-intron
Homo Sapiens
XM_017011004.2
2..23
95.5%
-
6

NM_170679.2
6..82
96.1%
+
5
1
0
0
intron-exon
Homo Sapiens
XM_017011004.2
2..23
95.5%
-
6

NM_170679.2
6..82
96.1%
+
5
1
0
0
intron-exon
Homo Sapiens LINC00174
ENST00000640964
1..8
95.2%
-
7

NM_170679.2
5..559
99.9%
-
5
1
0
0
intron-exon
Mus musculus
XM_006532786.2
16..280
100.0%
+
11

NM_023821.3
280..304
100.0%
-
13
1
0
0
exon-intron
Homo Sapiens
XM_011532055.3
8..191
97.9%
+
4

NM_170679.2
185..343
98.2%
-
5
1
0
0
intron-intron

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