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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SIPA1L3'

Total of fusion sequences: 15 (from 3,568,812 parsed EST/mRNAs. Last update: 2020-07-14 10:36:55)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
11
Homo Sapiens

NM_001287246.1
221..643
96.5%
-
15

XM_011526657.2
614..658
97.8%
+
19
1
0
0
intron-intron
12
Homo Sapiens

XM_011526657.2
8..301
99.4%
+
19
CNNM2
Q9H8M5

XR_001747118.1
282..304
100.0%
-
10
1
0
0
intron-intron
13
Homo Sapiens

NM_053275.3
1..429
99.8%
-
12

NM_015073.2
426..457
100.0%
-
19
1
0
0
exon-intron
14
Homo Sapiens
283..304
95.5%
-
19
LPAR3
Q9UBY5
298..320
95.7%
+
1
1
0
0
exon-exon
15
Homo Sapiens
TMEM132C
Q8N3T6

XR_001748922.1
235..312
95.8%
-
12

XM_011526657.2
261..460
97.4%
+
19
1
0
0
intron-intron

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