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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SIPA1L3'

Total of fusion sequences: 15 (from 3,568,812 parsed EST/mRNAs. Last update: 2020-07-14 10:36:55)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_002447.3
2..102
98.0%
-
3

NM_015073.2
101..202
100.0%
+
19
1
0
0
exon-exon
2
Homo Sapiens

XM_011526657.2
1..49
100.0%
+
19

NM_001114093.1
6..75
98.6%
+
19
1
0
0
intron-intronBREAKPOINTs
22975805
25500544
3
Homo Sapiens

NM_015073.2
8..89
100.0%
+
19

XM_005258671.4
84..317
100.0%
-
19
1
0
0
intron-intron
4
Homo Sapiens

XM_011526657.2
1..91
97.1%
+
19

XM_024453746.1
18..602
99.7%
-
3
2
0
5
intron-intron
5
Homo Sapiens

XM_005258671.4
1..91
97.1%
+
19

XM_024453746.1
18..608
99.4%
-
3
2
0
5
intron-intron
6
Homo Sapiens

XM_011526657.2
9..302
100.0%
+
19

XM_005261428.2
284..307
100.0%
+
22
1
0
0
intron-intron
7
Homo Sapiens

XM_011526657.2
9..302
100.0%
+
19

XM_005261428.2
284..307
100.0%
+
22
1
0
0
intron-intron
8
Homo Sapiens
ATF4P4 1..830
96.1%
+
11

XM_005258671.4
828..849
100.0%
+
19
1
0
0
exon-intron
9
Homo Sapiens

NM_000661.4
1..406
96.6%
-
4

XM_011526657.2
268..422
95.7%
+
19
1
0
0
exon-intron
10
Homo Sapiens

XR_926215.3
11..534
98.9%
-
6

XM_005258671.4
519..536
95.7%
+
19
1
0
0
intron-intron

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