Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SIAH1'

Total of fusion sequences: 12 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_001348078.1
2..553
99.1%
+
16

XM_024450394.1
552..682
96.2%
-
16
3
719
762
exon-exon1RNA-seq
2
Homo Sapiens

XM_024450394.1
1..28
100.0%
-
16

NM_001348078.1
26..259
100.0%
+
16
0
6309
6250
exon-intron
3
Homo Sapiens

XM_024450394.1
1..201
99.1%
-
16

NM_001348078.1
191..220
96.6%
+
16
3
0
0
exon-intron
4
Homo Sapiens

XM_024450394.1
1..201
100.0%
-
16

NM_001348078.1
191..220
96.6%
+
16
3
0
0
exon-intron
5
Homo Sapiens

XM_024450394.1
1..201
99.6%
-
16

NM_001348078.1
191..220
96.6%
+
16
3
0
0
exon-intron
6
Homo Sapiens
AC124944.3 19..269
97.8%
-
3

XM_024450394.1
65..276
95.8%
-
16
1
0
0
intron-intron
7
Homo Sapiens

XM_006714787.1
1..65
95.5%
-
5

XM_024450394.1
11..109
95.9%
+
16
1
0
0
intron-intron
8
Homo Sapiens

XM_024450394.1
8..275
100.0%
-
16

NM_032048.2
271..294
100.0%
-
18
1
0
0
exon-intron
9
Homo Sapiens

XM_011538042.2
1..152
95.4%
-
12

XM_024450394.1
68..177
95.3%
-
16
1
0
0
intron-intron
10
Homo Sapiens
1..190
97.8%
-
16
3..471
97.7%
-
18
1
0
0
intron-intron

T o p