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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SHFM1'

Total of fusion sequences: 22 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_006304.1
18..155
100.0%
-
7

NM_001017963.2
155..267
100.0%
-
14
3
0
6
exon-exon
2
Homo Sapiens
SplGraphs
NM_001349698.1
1..231
100.0%
-
7

XM_005254443.1
231..575
100.0%
-
15
1
0
0
intron-exon
3
Homo Sapiens
ChimerDB
NM_006304.1
18..155
100.0%
-
7

NM_001017963.2
155..261
100.0%
-
14
3
0
6
exon-exon
4
Homo Sapiens
ChimerDB
NM_006304.1
18..155
100.0%
-
7

NM_001017963.2
155..449
100.0%
-
14
3
0
508
exon-exon
5
Homo Sapiens
ChimerDB
ATP8
46..116
95.9%
-
MT

NM_001349698.1
115..332
99.1%
-
7
1
0
0
exon-exon
6
Homo Sapiens

NM_001349698.1
1..450
99.2%
-
7
SEM1P1 44..463
96.2%
+
5
3
0
2
exon-exon
7
Homo Sapiens

NM_001349698.1
2..430
99.6%
-
7
SEM1P1 24..440
96.0%
+
5
3
0
2
exon-exon
8
Homo Sapiens
SEM1P1 2..418
96.9%
-
5

NM_006304.1
8..438
100.0%
+
7
3
0
4
exon-exon
9
Homo Sapiens

NM_001349698.1
2..422
99.6%
-
7
SEM1P1 24..433
96.4%
+
5
3
0
2
exon-exon
10
Homo Sapiens

NM_006304.1
1..423
100.0%
-
7

NR_135623.1
422..441
100.0%
-
Y
1
0
0
exon-intron

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