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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SH3KBP1'

Total of fusion sequences: 22 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
11
Homo Sapiens

XM_011545499.3
57..891
96.0%
-
X

XM_011519230.2
867..913
96.0%
-
9
1
0
0
intron-intron
12
Homo Sapiens

NM_006082.2
1..237
100.0%
-
12

XM_011545498.3
229..920
97.5%
-
X
1
0
0
exon-exon
13
Homo Sapiens

XM_011545498.3
1..23
100.0%
-
X

NM_001145260.1
18..460
100.0%
+
10
1
0
0
intron-exon
14
Homo Sapiens

XM_011545498.3
8..44
95.3%
-
X

XM_011545507.3
45..97
95.3%
-
X
1
0
0
intron-intron
15
Homo Sapiens

XM_011545502.2
69..178
100.0%
-
X

NM_002490.4
124..398
99.7%
-
22
1
0
0
intron-exon
16
Homo Sapiens

XM_011545498.3
1..133
100.0%
+
X
HOPX
Q9BPY8

NM_001145460.1
128..255
100.0%
-
4
1
0
0
intron-exon
17
Homo Sapiens
12..809
99.8%
-
11
790..810
100.0%
+
X
1
0
0
intron-intron
18
Homo Sapiens
LOC105372896
XR_922530.3
50..95
100.0%
-
1

XM_011545498.3
90..210
100.0%
+
X
1
0
0
intron-intron
19
Homo Sapiens

XM_011516165.3
4..23
100.0%
-
7

XM_011545498.3
14..582
100.0%
-
X
1
0
0
intron-exon
20
Homo Sapiens
SEC24B-AS1
ENST00000499713
1..324
98.8%
-
4

XM_011545498.3
256..359
96.2%
-
X
1
0
0
intron-intron

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