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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SFTPB'

Total of fusion sequences: 10 (from 2,403,910 parsed EST/mRNAs. Last update 2020-02-09 10:24:42)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_003991.3
1..1784
99.8%
-
13

NM_000542.3
1777..1934
100.0%
-
2
1
0
0
exon-exon
2
Homo Sapiens

NM_000542.3
47..155
100.0%
-
2

NM_000542.3
154..240
100.0%
+
2
0
1879
2803
intron-exon
3
Homo Sapiens

NM_000542.3
1..279
100.0%
+
2

NM_000542.3
273..392
96.1%
-
2
0
1879
2803
intron-intron
4
Homo Sapiens

NM_000542.3
18..352
100.0%
+
2
MT-TE 348..415
98.6%
+
MT
1
0
0
exon-intron
5
Homo Sapiens

NM_000542.3
1..342
99.5%
-
2

NM_001005474.2
339..471
99.3%
+
3
1
0
0
intron-intron
6
Homo Sapiens

XM_011537574.2
12..170
100.0%
+
5

NM_000542.3
157..240
98.9%
-
2
1
0
0
intron-exon
7
Homo Sapiens

XM_005250043.4
1..483
99.8%
-
7

NM_000542.3
477..865
99.5%
-
2
1
0
0
exon-exon
8
Homo Sapiens

NM_000542.3
19..121
99.1%
+
2

NM_001199856.1
110..266
100.0%
-
9
1
0
0
intron-exon
9
Homo Sapiens

NM_000542.3
18..627
100.0%
+
2

NM_152321.3
623..702
97.5%
-
12
1
0
0
exon-exon
10
Homo Sapiens

NM_000542.3
1..481
100.0%
-
2

NM_001286272.1
482..754
99.7%
+
13
1
0
0
exon-intron

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