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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SEC13'

Total of fusion sequences: 10 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_001290256.1
24..77
100.0%
-
14

XM_024453702.1
72..549
99.6%
-
3
1
0
0
exon-exon
2
Homo Sapiens

XM_011514725.3
1..339
100.0%
-
6

XM_017007020.2
335..725
98.5%
-
3
1
0
0
exon-intron
3
Homo Sapiens
8..339
100.0%
-
3
LOC101927511 14..355
95.4%
+
18
0
2802
0
intron-intron
4
Homo Sapiens
LOC101927511
XR_001753359.1
1..232
95.3%
-
18

XM_024453701.1
17..457
100.0%
+
3
3
535
0
exon-exon
5
Homo Sapiens
LOC101927511
XR_001753359.1
1..230
95.3%
-
18

XM_024453701.1
15..585
100.0%
+
3
3
535
0
exon-exon
6
Homo Sapiens

XM_024453701.1
1..656
99.4%
-
3
LOC101927511
XR_001753359.1
333..674
95.6%
+
18
3
56
0
exon-exon
7
Homo Sapiens
LOC101927511
XR_001753359.1
1..340
95.6%
-
18

XM_024453701.1
15..725
99.9%
+
3
3
56
0
exon-exon
8
Homo Sapiens

XM_005245198.4
342..599
95.4%
-
1

ENST00000337354
590..620
100.0%
-
3
1
0
0
exon-intron
9
Homo Sapiens

NM_019059.3
18..262
99.6%
-
7

XM_017007020.2
257..379
99.2%
-
3
1
0
0
intron-exon
10
Homo Sapiens

ENST00000337354
1..110
96.4%
-
3

XM_017029659.2
104..389
99.0%
+
X
1
0
0
intron-intron

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