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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SDHD'

Total of fusion sequences: 14 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_001276506.1
1..198
98.5%
+
11

NM_152381.5
199..309
96.3%
+
2
1
0
0
exon-exon
2
Homo Sapiens

NR_077060.1
1..5
98.9%
-
11

NR_028383.1
6..84
98.9%
-
11
1
0
0
intron-exon
3
Homo Sapiens

XM_005261831.3
1..26
100.0%
-
22

NM_001276506.1
20..638
99.9%
-
11
2
0
3
intron-exon
4
Homo Sapiens

XM_005261831.3
1..26
100.0%
-
22

NM_001276506.1
20..635
99.9%
-
11
2
0
3
intron-exon
5
Homo Sapiens
GTF2IP1
NR_002206.3
48..733
99.2%
-
7

NM_001276506.1
733..757
100.0%
-
11
1
0
0
exon-intron
6
Homo Sapiens

NM_001276506.1
2..394
99.8%
+
11

NM_001042414.3
392..439
97.8%
+
13
1
0
0
exon-intron
7
Homo Sapiens

NM_001276506.1
14..332
98.7%
+
11
AC012593.1 322..347
100.0%
+
2
1
0
0
exon-intron
8
Homo Sapiens

NR_077060.1
1..487
99.8%
+
11

NM_001353749.1
483..584
95.6%
-
18
1
0
0
exon-exon
9
Homo Sapiens

NM_001276506.1
4..595
98.8%
+
11

NR_135790.1
26..713
97.0%
-
1
1
0
0
exon-intron
10
Homo Sapiens

NR_135324.1
4..31
96.3%
-
13

NR_077060.1
15..509
99.0%
-
11
1
0
0
exon-exon

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