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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SCUBE3'

Total of fusion sequences: 7 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SCUBE3
Q8IX30

XM_005248943.1
14..184
98.9%
+
6

XM_024454142.1
161..193
100.0%
+
4
2
13
0
exon-intron
2
Homo Sapiens
SCUBE3
Q8IX30

XM_005248943.1
14..178
99.4%
+
6

XM_024454142.1
161..194
97.1%
+
4
2
13
0
exon-intron
3
Homo Sapiens
SCUBE3
Q8IX30

XM_011514404.2
1..64
100.0%
+
6
SCUBE3
Q8IX30

XM_011514404.2
60..658
95.5%
-
6
1
0
0
intron-intron
4
Homo Sapiens
SCUBE3
Q8IX30

XM_005248943.1
14..243
99.6%
+
6

XM_017012174.1
238..270
100.0%
-
7
1
0
0
exon-exon
5
Homo Sapiens
SCUBE3
Q8IX30

XM_011514404.2
39..73
97.2%
+
6

XM_005264317.3
54..100
100.0%
+
2
1
0
0
intron-intron
6
Homo Sapiens
SCUBE3
Q8IX30

XM_005248943.1
14..244
100.0%
+
6

XR_001749568.1
242..261
100.0%
-
13
1
0
0
exon-intron
7
Homo Sapiens
SCUBE3
Q8IX30

XM_005248943.1
14..186
98.9%
+
6

NM_015322.4
168..203
97.3%
+
15
1
0
0
exon-intron

T o p