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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SCP2'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_002979.4
1..544
99.9%
+
1

NR_144641.1
540..579
100.0%
-
10
1
0
0
exon-exon
2
Homo Sapiens

NM_001102669.2
1..2195
100.0%
-
11

NM_001330587.1
272..2202
98.1%
-
1
0
5979
0
exon-exon
3
Homo Sapiens

NM_001177314.1
1..2040
100.0%
-
11

NM_001330587.1
116..2047
98.1%
-
1
0
5979
0
exon-exon
4
Homo Sapiens

NM_002979.4
1..389
99.8%
+
1
LOC101927044
XR_001753324.1
389..437
98.0%
+
18
1
0
0
exon-intron
5
Homo Sapiens

XM_006720247.4
6..40
96.6%
+
14

NM_002979.4
25..770
99.9%
-
1
1
0
0
intron-exon
6
Homo Sapiens
H3F3AP4
NR_002315.1
8..543
99.9%
+
2

NM_002979.4
530..551
100.0%
-
1
1
0
0
exon-intron
7
Homo Sapiens

NM_002979.4
14..367
99.5%
-
1
PJA2
O43164

XM_017010099.2
350..433
97.6%
+
5
1
0
0
exon-exon
8
Homo Sapiens

NM_002979.4
1..809
99.4%
+
1

XR_001751325.1
803..826
100.0%
+
15
1
0
0
intron-intron
9
Homo Sapiens

NM_002979.4
8..111
100.0%
+
1
AP001804.1 95..114
100.0%
+
11
1
0
0
exon-intron
10
Homo Sapiens
RP11-90J7.3 1..20
100.0%
-
10
5..104
100.0%
-
1
1
0
0
intron-intron

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