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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SCN8A'

Total of fusion sequences: 9 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
XM_011538651.3
9..35
99.7%
-
12
SLC4A8
Q2Y0W8

XM_024449282.1
36..517
99.7%
-
12
1
0
0
intron-exon
Homo Sapiens
NR_138470.1
4..771
98.4%
+
2

NM_014191.3
264..823
95.6%
-
12
0
0
1032
exon-intron
Homo Sapiens
NR_138470.1
1..701
99.9%
+
2

NM_014191.3
81..714
97.2%
-
12
0
0
1032
exon-intron
Homo Sapiens
XM_017026845.1
1..304
98.1%
+
19

XM_011538651.3
292..480
98.5%
-
12
2
0
7
exon-exon
Homo Sapiens
XM_017026845.1
1..321
98.5%
+
19

XM_011538651.3
303..490
99.5%
-
12
2
0
7
exon-exon
Homo Sapiens
NM_014191.3
1..43
100.0%
+
12
LOC105377290
XR_001741404.1
35..384
99.2%
-
4
1
0
0
intron-exon
Homo Sapiens
NM_014191.3
1..136
95.0%
+
12

NM_001202233.1
137..240
95.0%
+
12
1
0
0
intron-intron
Homo Sapiens
XM_011538651.3
22..461
99.8%
-
12
TALAM1
NR_145459.1
443..603
96.9%
-
11
1
0
0
exon-exon
Homo Sapiens
NM_014191.3
21..40
100.0%
-
12

XM_011535282.1
29..334
100.0%
-
13
1
0
0
intron-intron

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