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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SCFD1'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_080664.2
1..220
99.6%
-
14

NM_016106.3
211..531
99.7%
+
14
1
0
0
exon-exon
2
Homo Sapiens

NM_017658.4
1..500
99.4%
-
14

NM_016106.3
494..628
98.6%
+
14
1
0
0
exon-intron
3
Homo Sapiens

NM_016106.3
3..105
100.0%
-
14

NM_004529.3
106..205
100.0%
+
9
0
1
65535
intron-intron
4
Homo Sapiens
68..145
100.0%
-
14
146..245
100.0%
+
9
1
0
0
exon-exon
5
Homo Sapiens
4..103
100.0%
-
14
104..203
100.0%
+
9
1
0
0
exon-exon
6
Homo Sapiens
7..88
96.3%
-
14
89..188
100.0%
+
9
1
0
0
exon-exon
7
Homo Sapiens

XR_002957538.1
1..22
100.0%
+
14

NM_014225.5
3..203
100.0%
+
19
1
0
0
exon-exon
8
Homo Sapiens
LOC105378189
XM_011537451.3
1..25
100.0%
+
14

XR_002957538.1
12..91
100.0%
-
14
1
0
0
intron-exon
9
Homo Sapiens

NM_016106.3
1..108
97.2%
+
14

NM_032890.4
91..115
100.0%
-
1
1
0
0
exon-intron
10
Homo Sapiens

XM_011523769.2
1..133
96.1%
-
17

XR_002957538.1
21..578
99.9%
-
14
1
0
0
intron-intron

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