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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SCCPDH'

Total of fusion sequences: 11 (from 12,196,033 parsed EST/mRNAs. Last update 2021-05-29)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_016002.2
1..311
100.0%
+
1

XM_005269104.1
306..567
99.7%
-
12
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
NM_016002.2
3..271
97.1%
-
1

XR_001753747.1
270..509
99.2%
+
19
1
0
0
exon-exon
3
Homo Sapiens
ChimerDB
NM_016002.2
8..95
100.0%
+
1
LUM
P51884

NM_002345.3
94..300
100.0%
-
12
1
0
0
exon-exon
4
Homo Sapiens

NR_037894.1
1..222
100.0%
-
1

NM_016002.2
220..574
100.0%
+
1
1
0
0
exon-exon
5
Homo Sapiens
79..105
100.0%
-
1
92..114
95.7%
+
11
1
0
0
intron-intron
6
Homo Sapiens

NM_016002.2
1..246
99.6%
+
1

XR_001741110.2
236..382
100.0%
-
4
1
0
0
exon-intron
7
Homo Sapiens
PVT1 108..128
100.0%
-
8
114..559
99.6%
+
1
1
0
0
exon-exon
8
Homo Sapiens

NM_016002.2
1..333
98.2%
+
1

XM_017024837.1
331..361
100.0%
+
17
1
0
0
exon-intron
9
Homo Sapiens

NM_016002.2
2..530
98.9%
+
1

ENST00000421515
529..550
100.0%
+
3
1
0
0
intron-intron
10
Homo Sapiens
171..194
100.0%
+
1
188..393
95.4%
+
1
1
0
0
intron-intron

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