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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SCAMP3'

Total of fusion sequences: 9 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NM_005698.3
1..136
100.0%
+
1

NM_005698.3
132..201
100.0%
-
1
0
204
4554
exon-exon
Homo Sapiens
NM_005698.3
17..308
99.7%
+
1

NM_005698.3
304..362
98.4%
+
1
0
204
4554
exon-exon
Homo Sapiens
NM_005698.3
1..268
98.9%
-
1
LINC00174
NR_026873.1
244..278
96.6%
-
7
1
0
0
exon-intron
Homo Sapiens LINC00174
NR_026873.1
2..36
96.6%
+
7

NM_005698.3
12..335
100.0%
+
1
1
0
0
intron-exon
Homo Sapiens
ENST00000398947
12..36
100.0%
+
4

NM_005698.3
33..440
100.0%
-
1
2
0
54
intron-exon
Homo Sapiens
ENST00000398947
12..36
100.0%
+
4

NM_005698.3
33..386
99.5%
-
1
2
0
54
intron-exon
Homo Sapiens
XM_011542326.2
1..31
96.7%
-
1

NM_005698.3
21..103
100.0%
-
1
1
0
0
intron-exon
Homo Sapiens 12..36
100.0%
+
8
13..130
100.0%
-
1
1
0
0
intron-intron
Homo Sapiens
NM_005698.3
1..195
100.0%
-
1
MT-RNR2
Q8IVG9
193..320
100.0%
-
MT
1
0
0
exon-intron

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