Search Database Collection
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Updates:
Result for the search of Gene Name/NCBI ID(s):
'SAMM50'
Total of fusion sequences: 22 (from 12,143,238 parsed EST/mRNAs. Last update: 2021-04-05 16:54:11)
Organism |
Fusion:
Graphical View,
Annotation,
PPI network
|
Head Gene (1) |
Tail Gene (2) |
Rank,
Deviation:
Eloc(x)
Sloc(y)
|
Fusion type RNA |
Hi-C, RNAseq, Mass-spec evidences |
Cancer Breakpoint, PubMed(s) |
Name(s)1, transcript |
Start1..End1
Ident1%
|
Strand1 Chrom1
|
Name(s)2, transcript |
Start2..End2
Ident2%
|
Strand2 Chrom2
|
1 | 2 | 3 | 4,5,6 | 7,19 | 8 | 9,10,11 | 12,25 | 13,14,15 | 32 | 16 | 17 |
1 Homo Sapiens | ChimerDB
| SAMM50 Q9Y512
 NM_015380.4 | 19..243 99.6% | - 22 | UNC5B Q8IZJ1
 NM_170744.4 | 235..667 100.0% | - 10 | 1 0 0 | exon-exon | |
 |
2 Homo Sapiens |
|
 XR_002959600.1 | 1..100 99.0% | - 3 | SAMM50 Q9Y512
 NM_015380.4 | 34..119 95.4% | - 22 | 1 0 0 | intron-intron | |
 |
3 Homo Sapiens |
|
 XR_002959600.1 | 1..100 99.0% | - 3 | SAMM50 Q9Y512
 NM_015380.4 | 34..119 95.4% | - 22 | 1 0 0 | intron-intron | |
 |
4 Homo Sapiens |
|
 XR_002959600.1 | 7..97 98.9% | - 3 | SAMM50 Q9Y512
 NM_015380.4 | 34..116 96.4% | - 22 | 1 0 0 | intron-intron | |
 |
5 Homo Sapiens |
|
 XR_002959600.1 | 7..102 99.0% | - 3 | SAMM50 Q9Y512
 NM_015380.4 | 36..121 95.4% | - 22 | 1 0 0 | intron-intron | |
 |
6 Homo Sapiens |
|
 XR_002959600.1 | 9..109 100.0% | - 3 | SAMM50 Q9Y512
 NM_015380.4 | 43..128 95.4% | - 22 | 1 0 0 | intron-intron | |
 |
7 Homo Sapiens |
|
 XR_002959600.1 | 7..101 100.0% | - 3 | SAMM50 Q9Y512
 NM_015380.4 | 35..120 95.4% | - 22 | 1 0 0 | intron-intron | |
 |
8 Homo Sapiens |
|
 XR_002959600.1 | 21..111 97.8% | - 3 | SAMM50 Q9Y512
 NM_015380.4 | 47..130 95.2% | - 22 | 1 0 0 | intron-intron | |
 |
9 Homo Sapiens |
|
 XR_002959600.1 | 2..97 100.0% | - 3 | SAMM50 Q9Y512
 NM_015380.4 | 31..116 95.4% | - 22 | 1 0 0 | intron-intron | |
 |
10 Homo Sapiens |
|
 XR_002959600.1 | 10..99 98.9% | - 3 | SAMM50 Q9Y512
 NM_015380.4 | 35..118 95.2% | - 22 | 1 0 0 | intron-intron | |
 |
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