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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Rtn3'

Total of fusion sequences: 11 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_001003934.2
4..149
100.0%
-
19

NM_130449.2
146..236
100.0%
+
18
1
0
0
intron-exon
2
Mus musculus
SplGraphs
NM_001003934.2
3..153
100.0%
-
19

XM_011242104.2
147..378
98.8%
-
8
1
0
0
exon-exon
3
Mus musculus
SplGraphs
NM_001003934.2
1..114
100.0%
-
19

NM_080638.3
115..562
100.0%
-
7
1
0
0
exon-exon
4
Mus musculus

NM_172161.4
1..3052
100.0%
+
6

NM_001003934.2
2798..3065
95.8%
-
19
1
0
0
exon-intron
5
Mus musculus

NM_172161.4
1..3196
100.0%
+
6

NM_001003934.2
2942..3209
95.8%
-
19
1
0
0
exon-intron
6
Mus musculus

NM_001003934.2
1..279
95.6%
+
19
1600020E01Rik
NR_037960.1
98..427
98.1%
-
6
1
0
0
intron-intron
7
Mus musculus

NM_015764.4
1..20
100.0%
-
12

NM_001003934.2
21..501
99.0%
+
19
1
0
0
intron-exon
8
Mus musculus
Btbd7
Q8CFE5

XM_006515855.3
12..485
99.8%
-
12

NM_001003934.2
485..506
100.0%
+
19
1
0
0
exon-intron
9
Mus musculus

XM_006533333.2
1..46
100.0%
+
11

NM_001003934.2
39..547
96.5%
-
19
1
0
0
exon-exon
10
Mus musculus

NM_001003934.2
1..26
100.0%
-
19

XM_006510602.3
16..529
99.7%
+
9
1
0
0
intron-exon

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