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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Rpl13a'

Total of fusion sequences: 33 (from 12,143,238 parsed EST/mRNAs. Last update: 2021-04-05 16:54:11)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_009438.5
1..594
99.4%
+
7

XM_006534402.2
360..662
95.2%
+
11
0
1332
0
exon-intron
2
Mus musculus

NM_009438.5
1..738
99.9%
-
7
Rpl13a-ps1 112..759
95.6%
-
19
0
1093
70
intron-intron
3
Mus musculus

XM_006534402.2
26..775
95.9%
+
11

NM_009438.5
39..1015
99.0%
+
7
5
252
13
intron-exon
4
Mus musculus

NM_009438.5
1..467
98.3%
+
7

XM_006534402.2
363..475
96.5%
+
11
5
206
7
exon-intron
5
Mus musculus

NM_009438.5
1..480
100.0%
+
7
Gm6023 9..487
95.9%
+
X
3
136
0
exon-exon
6
Mus musculus

NM_009438.5
4..115
100.0%
-
7

XM_017318029.1
17..123
95.3%
-
2
3
99
0
exon-intron
7
Mus musculus
Gm6023 1..617
95.0%
-
X

NM_009438.5
2..624
100.0%
-
7
3
0
1
exon-exon
8
Mus musculus
Gm6023 1..617
95.0%
-
X

NM_009438.5
2..625
100.0%
-
7
3
0
1
exon-exon
9
Mus musculus

NM_009438.5
1..559
100.0%
-
7

XM_017318029.1
362..567
95.2%
-
2
3
0
0
exon-intron
10
Mus musculus

NM_009438.5
1..559
100.0%
-
7

XM_017318029.1
362..567
95.2%
-
2
3
0
0
exon-intron

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