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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Rit2'

Total of fusion sequences: 10 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_009065.2
34..105
100.0%
+
18

NM_009065.2
103..298
100.0%
-
18
3
106
128
exon-exon
2
Mus musculus

NM_009065.2
12..92
98.8%
+
18

NM_009065.2
89..179
97.9%
-
18
3
0
2
exon-exon
3
Mus musculus

NM_009065.2
1..79
98.8%
+
18

NM_009065.2
76..165
100.0%
-
18
3
0
2
exon-exon
4
Mus musculus

NM_009065.2
1..23
100.0%
-
18

NM_026155.3
17..644
99.7%
+
3
1
0
0
intron-exon
5
Mus musculus

NM_001083945.1
3..384
100.0%
-
17

NM_009065.2
360..402
97.3%
+
18
1
0
0
exon-intron
6
Mus musculus

NM_009065.2
3..23
100.0%
-
18
Spag17
Q5S003

NM_028892.4
17..883
99.0%
+
3
1
0
0
intron-intron
7
Mus musculus

NM_001111121.1
47..776
96.3%
-
10

NM_009065.2
774..809
96.6%
+
18
1
0
0
exon-intron
8
Mus musculus

NM_009065.2
110..265
95.2%
-
18

NM_011678.2
139..266
95.4%
+
9
1
0
0
intron-intron
9
Mus musculus

NM_009065.2
4..33
100.0%
-
18

XM_006508649.3
12..446
98.7%
+
7
1
0
0
intron-exon
10
Mus musculus

NM_025650.2
5..83
100.0%
-
10

NM_009065.2
80..494
99.3%
-
18
1
0
0
exon-exon

T o p