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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Rabgef1'

Total of fusion sequences: 14 (from 2,544,974 parsed EST/mRNAs. Last update 2020-03-27 15:38:11)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_025551.3
1..567
99.9%
+
10

XM_006504446.3
76..579
99.1%
+
5
4
0
0
exon-intron
2
Mus musculus

NM_025551.3
38..558
100.0%
+
10

XM_006504446.3
69..578
98.5%
+
5
4
1
0
exon-intron
3
Mus musculus

NM_025551.3
39..568
99.1%
+
10

XM_006504446.3
77..579
98.0%
+
5
4
1
0
exon-intron
4
Mus musculus

NM_025551.3
27..548
99.9%
+
10

XM_006504446.3
60..566
98.9%
+
5
4
1
0
exon-intron
5
Mus musculus
Gm8557 34..594
95.1%
+
12

XM_006504446.3
57..630
95.4%
-
5
2
0
1
exon-intron
6
Mus musculus
Gm8557 27..590
95.4%
+
12

XM_006504446.3
57..626
95.6%
-
5
2
0
1
exon-intron
7
Mus musculus

NM_025551.3
1..549
97.0%
+
10

XM_006504446.3
44..561
95.1%
+
5
4
0
0
exon-intron
8
Mus musculus

NM_025551.3
1..535
98.7%
+
10

XM_006504446.3
44..547
98.7%
+
5
4
0
0
exon-intron
9
Mus musculus

NM_025551.3
20..519
100.0%
+
10

XM_006504446.3
53..533
99.0%
+
5
4
0
25
exon-intron
10
Mus musculus

NM_025551.3
38..571
99.9%
+
10

XM_006504446.3
80..583
99.1%
+
5
4
0
0
exon-intron

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