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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Rabgap1l'

Total of fusion sequences: 11 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculus
XM_006496876.1
68..292
100.0%
+
1

XM_006496876.1
286..565
99.3%
-
1
1
0
0
exon-exon
Mus musculus Malat1
B0LAE7

NR_002847.2
57..347
99.2%
-
19

XM_006496876.1
201..408
95.1%
-
1
2
236
3
exon-intron
Mus musculus Malat1
B0LAE7

NR_002847.2
20..550
99.7%
-
19

XM_006496876.1
399..605
95.5%
-
1
2
236
3
exon-intron
Mus musculus
NM_013862.5
2..468
99.6%
-
1

XM_006507807.3
460..486
100.0%
-
7
1
0
0
exon-intron
Mus musculus
XM_006496876.1
149..239
98.0%
+
1
Nxn
P97346

NM_008750.5
208..279
96.0%
+
11
1
0
0
intron-intron
Mus musculus
XM_006533089.2
29..804
99.4%
+
11

XM_006496876.1
689..858
95.6%
-
1
1
0
0
intron-intron
Mus musculus 179..214
97.3%
+
1
195..323
95.8%
+
1
1
0
0
exon-exon
Mus musculus Gm29216 38..583
99.9%
-
1

XM_006496876.1
580..601
100.0%
+
1
1
0
0
intron-intron
Mus musculus Eif1-ps2 19..478
95.2%
+
13

XM_006496876.1
478..537
95.7%
-
1
1
0
0
intron-intron
Mus musculus
XM_006496876.1
1..134
97.8%
+
1
Galnt2
Q6PB93

NM_139272.2
20..613
100.0%
-
8
1
0
0
intron-exon

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