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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Rab1a'

Total of fusion sequences: 23 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_008996.3
1..376
100.0%
+
11

XM_017321650.1
375..575
100.0%
-
6
1
0
0
exon-exon
2
Mus musculus
SplGraphs
XR_391101.3
10..192
99.5%
-
7

NM_008996.3
191..376
100.0%
+
11
1
0
0
exon-exon
3
Mus musculus
SplGraphs
NM_019794.4
37..197
100.0%
-
8

NM_008996.3
193..648
99.4%
+
11
1
0
0
intron-intron
4
Mus musculus

XM_006524864.3
1..210
99.6%
+
17

NM_008996.3
11..461
100.0%
-
11
8
0
27
exon-exon
5
Mus musculus

XM_006524864.3
1..217
99.1%
+
17

NM_008996.3
21..504
100.0%
-
11
8
0
8
exon-exon
6
Mus musculus

XM_006524864.3
1..212
99.1%
+
17

NM_008996.3
13..491
99.8%
-
11
8
0
8
exon-exon
7
Mus musculus

XM_006524864.3
14..229
97.7%
+
17

NM_008996.3
30..315
98.3%
-
11
8
0
78
exon-exon
8
Mus musculus

XM_006524864.3
1..216
99.6%
+
17

NM_008996.3
17..879
97.0%
-
11
8
0
200
exon-exon
9
Mus musculus

XM_006524864.3
7..200
98.5%
+
17

NM_008996.3
23..208
98.4%
-
11
8
0
78
exon-exon
10
Mus musculus

XM_006524864.3
7..223
97.7%
+
17

NM_008996.3
23..600
99.0%
-
11
8
0
59
exon-exon

T o p