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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'RTN4'

Total of fusion sequences: 40 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_007008.2
1..401
98.8%
-
2

XM_017008138.2
395..448
100.0%
+
4
2
98
0
exon-exon
2
Homo Sapiens
SplGraphs
NM_001321904.1
1..86
100.0%
-
2

NM_001776.5
87..550
99.8%
+
10
1
0
0
exon-exon
3
Homo Sapiens
ChimerDB
XM_017008138.2
6..157
100.0%
-
4

NM_001321904.1
151..432
99.7%
+
2
2
98
0
exon-exon
4
Homo Sapiens
ChimerDB
NM_006335.2
4..46
100.0%
+
1

NM_001321904.1
46..633
99.5%
-
2
1
0
0
exon-exon
5
Homo Sapiens
SplGraphs 1..382
100.0%
-
2
381..584
100.0%
-
2
0
25034
23775
exon-exon
6
Homo Sapiens

NM_001321904.1
1..59
96.2%
+
2

XM_017004162.2
60..117
96.2%
+
2
1
0
0
intron-intron
7
Homo Sapiens
8..146
100.0%
-
2
145..342
100.0%
-
2
0
42488
38901
exon-exon
8
Homo Sapiens
1..322
100.0%
-
2
323..370
100.0%
-
2
0
25034
23775
exon-exon
9
Homo Sapiens

NM_007008.2
27..98
98.6%
+
2

NM_001321904.1
95..463
99.8%
-
2
0
22613
22669
exon-exon
10
Homo Sapiens

NM_001321904.1
1..139
100.0%
+
2

NM_001321904.1
138..399
98.1%
+
2
0
12870
9771
exon-exon

T o p