Result for the search of Gene Name/NCBI ID(s): 'RPS6KA3'

Total of fusion sequences: 8 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs CA843526 ANNOTATION OF CHIMERA FUSION GenBank ID: CA843526 FASTA Head Gene (1) Alignment: RPS6KA3 | OMIM: 300075 Tail Gene (2) Alignment: ACTR3 | OMIM: 604222 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6197 X - 20153352 20153845 1 1 protein-coding 10096 2 + 113957944 113958042 1 1 protein-coding 613 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to PsbQ (PF05757, IPR008797) 200 3 59 0.0093 1.800 Oxygen evolving enhancer protein 3 (PsbQ) Pkinase (PF00069, IPR000719) 264 137 396 5.8e-74 234.800 Protein kinase domain Pkinase_C (PF00433, IPR017892) 46 419 456 1.4e-10 28.000 Protein kinase C terminal domain Updated: 2019-02-21 Owner: ChiTaRS	RPS6KA3 A0A2R8Y603 A0A2R8Y7S9 A0A2R8YGB7 B1AXG1 B1AXG2 B4DG22 B7ZB17 P51812 Q7Z2E2 Q7Z2J3 Q7Z2J4 Q8TDJ4 XM_017029713.1	21..514 99.8%	- X	ACTR3 A0A024RAI1 B4DXW1 F8WDR7 F8WE84 F8WEW2 P61158 NM_005721.4	515..613 96.0%	+ 2	2 223 0	exon-exon
2 Homo Sapiens	SplGraphs DA592743 ANNOTATION OF CHIMERA FUSION GenBank ID: DA592743 FASTA Head Gene (1) Alignment: ITGA4 | OMIM: 192975 Tail Gene (2) Alignment: RPS6KA3 | OMIM: 300075 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3676 2 + 181458221 181458317 2 1 protein-coding 6197 X - 20193520 20234815 9 1 protein-coding 588 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Pkinase (PF00069, IPR000719) 264 151 410 7.6e-75 237.700 Protein kinase domain Pkinase_C (PF00433, IPR017892) 46 433 470 3.4e-11 30.100 Protein kinase C terminal domain Updated: 2019-02-21 Owner: ChiTaRS	ITGA4 A0A023IP86 A0A023IP88 A0A023IP90 A0A023IPA8 A0A023IPA9 A0A023IPH2 A0A023IPH8 A0A023IPI3 A0A023IQA6 A0A023IQJ3 A0A023IQJ5 A0A023IQK0 E7EP60 P13612 Q13682 Q68EM9 Q6PJE7 NM_000885.5	1..97 100.0%	+ 2	RPS6KA3 A0A2R8Y603 A0A2R8Y7S9 A0A2R8YGB7 B1AXG1 B1AXG2 B4DG22 B7ZB17 P51812 Q7Z2E2 Q7Z2J3 Q7Z2J4 Q8TDJ4 XM_017029713.1	97..588 100.0%	- X	1 0 0	exon-exon
3 Homo Sapiens	CA843287 ANNOTATION OF CHIMERA FUSION GenBank ID: CA843287 FASTA Head Gene (1) Alignment: ACTR3 | OMIM: 604222 Tail Gene (2) Alignment: RPS6KA3 | OMIM: 300075 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10096 2 - 113957944 113958257 12 1 protein-coding 6197 X + 20153352 20153622 24 1 protein-coding 585 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Actin (PF00022, IPR004000, SM00268) 407 108 517 6.6e-90 287.600 Actin Updated: 2019-02-21 Owner: ChiTaRS	ACTR3 A0A024RAI1 B4DXW1 F8WDR7 F8WE84 F8WEW2 P61158 NM_005721.4	1..314 99.4%	- 2	RPS6KA3 A0A2R8Y603 A0A2R8Y7S9 A0A2R8YGB7 B1AXG1 B1AXG2 B4DG22 B7ZB17 P51812 Q7Z2E2 Q7Z2J3 Q7Z2J4 Q8TDJ4 XM_017029713.1	315..585 100.0%	+ X	2 223 0	exon-exon
4 Homo Sapiens	EC459803 ANNOTATION OF CHIMERA FUSION GenBank ID: EC459803 FASTA Head Gene (1) Alignment: RPS6KA3 | OMIM: 300075 Tail Gene (2) Alignment: IMMP2L | OMIM: 605977 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6197 X - 20174462 20174661 0 0 protein-coding 83943 7 - 111282803 111282880 0 0 protein-coding 104 hg38 Updated: 2019-04-13 Owner: ChiTaRS	RPS6KA3 A0A2R8Y603 A0A2R8Y7S9 A0A2R8YGB7 B1AXG1 B1AXG2 B4DG22 B7ZB17 P51812 Q7Z2E2 Q7Z2J3 Q7Z2J4 Q8TDJ4 XM_006724507.3	13..78 97.9%	- X	IMMP2L A0A0C4DG32 A4D0S9 C9JQE1 C9JVB0 Q96T52 NM_001350961.1	30..104 97.4%	- 7	1 0 0	intron-intron
5 Homo Sapiens	EC561147 ANNOTATION OF CHIMERA FUSION GenBank ID: EC561147 FASTA Head Gene (1) Alignment: RPS6KA3 | OMIM: 300075 Tail Gene (2) Alignment: C12orf57 | OMIM: 615140 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6197 X + 20184355 20184377 0 0 protein-coding 113246 12 + 6944077 6944159 1 1 protein-coding 113 hg38 Updated: 2019-03-25 Owner: ChiTaRS	RPS6KA3 A0A2R8Y603 A0A2R8Y7S9 A0A2R8YGB7 B1AXG1 B1AXG2 B4DG22 B7ZB17 P51812 Q7Z2E2 Q7Z2J3 Q7Z2J4 Q8TDJ4 XM_006724507.3	17..38 100.0%	+ X	C12orf57 F5GXW5 Q99622 U3KQ07 U3KQ85 NM_001301838.1	39..113 98.7%	+ 12	1 0 0	intron-exon
6 Homo Sapiens	BG487432 ANNOTATION OF CHIMERA FUSION GenBank ID: BG487432 FASTA Head Gene (1) Alignment: ZFPM2 | OMIM: 603693 Tail Gene (2) Alignment: RPS6KA3 | OMIM: 300075 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 23414 8 + 104810235 104810442 2 0 protein-coding 6197 X - 20149919 20150186 24 1 protein-coding 483 hg38 Updated: 2019-02-21 Owner: ChiTaRS	ZFPM2 E5RJX0 E7ET52 Q32MA5 Q8WW38 ENST00000521923	1..208 100.0%	+ 8	RPS6KA3 A0A2R8Y603 A0A2R8Y7S9 A0A2R8YGB7 B1AXG1 B1AXG2 B4DG22 B7ZB17 P51812 Q7Z2E2 Q7Z2J3 Q7Z2J4 Q8TDJ4 XM_017029713.1	196..463 100.0%	- X	1 0 0	intron-exon
7 Homo Sapiens	AW006813 ANNOTATION OF CHIMERA FUSION GenBank ID: AW006813 FASTA Head Gene (1) Alignment: ANXA9 | OMIM: 603319 Tail Gene (2) Alignment: RPS6KA3 | OMIM: 300075 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 8416 1 + 150993208 150993406 12 0 protein-coding 6197 X + 19907182 20208797 24 0 protein-coding 340 hg38 Updated: 2019-02-20 Owner: ChiTaRS	ANXA9 O76027 NM_003568.2	1..199 98.7%	+ 1	RPS6KA3 A0A2R8Y603 A0A2R8Y7S9 A0A2R8YGB7 B1AXG1 B1AXG2 B4DG22 B7ZB17 P51812 Q7Z2E2 Q7Z2J3 Q7Z2J4 Q8TDJ4 XM_017029713.1	142..340 97.3%	+ X	1 0 0	intron-intron
8 Homo Sapiens	AJ012498 ANNOTATION OF CHIMERA FUSION GenBank ID: AJ012498 FASTA Head Gene (1) Alignment: RPS6KA3 | OMIM: 300075 Tail Gene (2) Alignment: PRPH2 | OMIM: 179605 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6197 X - 20171497 20171609 0 0 protein-coding 5961 6 - 42706981 42707001 0 0 protein-coding 122 hg38 Updated: 2019-04-01 Owner: ChiTaRS	RPS6KA3 A0A2R8Y603 A0A2R8Y7S9 A0A2R8YGB7 B1AXG1 B1AXG2 B4DG22 B7ZB17 P51812 Q7Z2E2 Q7Z2J3 Q7Z2J4 Q8TDJ4 XM_006724507.3	3..115 100.0%	- X	PRPH2 P23942 XR_926295.3	102..122 100.0%	- 6	1 0 0	intron-intron

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