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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'RPS13'

Total of fusion sequences: 39 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_001017.2
12..380
99.5%
-
11

NR_135008.1
372..554
99.0%
-
1
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
NM_001291916.1
4..404
99.8%
+
18

NM_001017.2
403..576
98.9%
-
11
1
0
0
exon-exon
3
Homo Sapiens
ChimerDB ATXN7L3B
Q96GX2

NM_001136262.1
1..469
99.8%
+
12

NM_001017.2
461..768
96.7%
-
11
1
0
0
exon-exon
4
Homo Sapiens

NM_001017.2
2..478
99.6%
-
11

NM_024646.2
274..494
97.0%
-
1
9
189
1
exon-intronBREAKPOINTs
29196615
5
Homo Sapiens

NM_001017.2
9..341
98.8%
-
11

NM_024646.2
10..351
95.9%
-
1
9
68
3
exon-intronBREAKPOINTs
29196615
6
Homo Sapiens

NM_001017.2
1..264
100.0%
-
11

NM_024646.2
62..277
96.8%
-
1
9
68
3
exon-intronBREAKPOINTs
29196615
7
Homo Sapiens

NM_001017.2
2..568
99.9%
-
11

XM_006710898.4
43..579
96.7%
-
1
9
55
0
exon-intronBREAKPOINTs
29196615
8
Homo Sapiens

NM_001017.2
40..581
100.0%
-
11

NM_024646.2
56..598
96.7%
-
1
9
16
0
exon-intronBREAKPOINTs
29196615
9
Homo Sapiens

NM_001017.2
14..508
100.0%
-
11

NM_024646.2
33..519
97.7%
-
1
9
4
0
exon-intronBREAKPOINTs
29196615
10
Homo Sapiens

NM_001017.2
39..526
99.8%
-
11

NM_024646.2
357..545
96.9%
-
1
9
4
2
exon-intronBREAKPOINTs
29196615

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