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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'RPLP0'

Total of fusion sequences: 56 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_001142353.2
30..587
100.0%
-
10

NM_053275.3
581..671
95.7%
-
12
1
0
0
exon-exon
2
Homo Sapiens

NM_001002.3
1..48
100.0%
-
12

NM_001002.3
42..285
100.0%
+
12
2
592
93
exon-exon
3
Homo Sapiens

NM_001002.3
8..104
100.0%
-
12

NM_001002.3
98..263
96.9%
+
12
2
592
93
exon-exon
4
Homo Sapiens

NM_001002.3
4..539
100.0%
-
12
RPLP0P9 176..557
99.0%
+
5
12
28
0
exon-exon
5
Homo Sapiens

NM_053275.3
1..515
99.9%
-
12
RPLP0P9 145..526
99.3%
+
5
12
14
0
exon-exon
6
Homo Sapiens

NM_053275.3
41..210
97.7%
+
12

NM_015965.6
209..721
100.0%
+
19
2
1
0
exon-exon
7
Homo Sapiens

NM_053275.3
41..216
97.8%
+
12

NM_015965.6
217..718
100.0%
+
19
2
1
0
exon-exon
8
Homo Sapiens

NM_053275.3
5..508
99.9%
-
12
RPLP0P9 474..513
100.0%
+
5
0
1495
0
exon-exon
9
Homo Sapiens

NM_001002.3
1..635
99.9%
-
12
RPLP0P9 268..643
99.0%
+
5
12
334
0
exon-exon
10
Homo Sapiens
RPLP0P6
Q8NHW5
13..358
95.7%
+
2

NM_001002.3
32..395
97.9%
-
12
10
218
489
exon-exon

T o p