Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'RPL36A'

Total of fusion sequences: 3 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
D.Melanogaster
CCDC53
Q9VLT8

NM_135334.5
2..7
100.0%
+
2L
RpL36A
Q9VLT7

NM_001298808.1
8..444
100.0%
+
2L
1
0
0
exon-exon
2
D.Melanogaster
CCDC53
Q9VLT8

NM_135334.5
2..7
100.0%
+
2L
RpL36A
Q9VLT7

NM_001298808.1
8..429
100.0%
+
2L
1
0
0
exon-exon
3
D.Melanogaster
RpL36A
Q9VLT7

NM_135335.4
1..347
100.0%
+
2L
CG13850
Q9VD14

NM_001275905.1
347..580
100.0%
-
3R
1
0
0
exon-exon

T o p