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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'RHOB'

Total of fusion sequences: 11 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_004040.3
3..173
99.5%
-
2

XM_011530408.2
168..386
99.6%
-
22
1
0
0
exon-intron
2
Homo Sapiens
ChimerDB
NM_004040.3
8..82
100.0%
-
2
UBE2D3P1 74..496
96.7%
+
20
1
0
0
exon-exon
3
Homo Sapiens
ChimerDB TRNR 37..646
100.0%
+
MT

NM_004040.3
642..816
99.5%
+
2
1
0
0
intron-exon
4
Homo Sapiens

NM_004040.3
1..862
99.1%
+
2
PRKCA-AS1
NR_110822.1
822..875
97.8%
-
17
1
0
0
exon-intron
5
Homo Sapiens

XM_005247224.3
8..56
97.5%
-
3

NM_004040.3
21..89
100.0%
-
2
1
0
0
intron-exon
6
Homo Sapiens

NM_004040.3
15..73
98.4%
-
2

NM_001282175.1
65..330
100.0%
+
19
1
0
0
exon-exon
7
Homo Sapiens

XM_017012968.2
3..142
96.5%
+
8

NM_004040.3
141..436
99.0%
-
2
1
0
0
intron-exon
8
Homo Sapiens

NM_004040.3
36..496
97.3%
+
2
LOC105371240
XR_933516.3
487..515
100.0%
-
16
1
0
0
exon-intron
9
Homo Sapiens

NM_004040.3
11..186
98.3%
-
2
LOC102723338
XR_001741755.1
187..207
100.0%
-
4
1
0
0
exon-intron
10
Homo Sapiens

NM_004040.3
1..145
99.4%
-
2
COX3
139..491
99.5%
-
MT
1
0
0
exon-exon

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