Result for the search of Gene Name/NCBI ID(s): 'RHOA'

Total of fusion sequences: 25 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs DA715882 ANNOTATION OF CHIMERA FUSION GenBank ID: DA715882 FASTA Head Gene (1) Alignment: RHOA | OMIM: 165390 Tail Gene (2) Alignment: CTNNB1 | OMIM: 116806 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 387 3 - 49411819 49411968 6 1 oncogene, tumor suppressor, protein-coding 1499 3 + 41224019 41225067 16 1 oncogene, protein-coding 552 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Arm (PF00514, IPR000225, SM00185) 41 366 405 4.5e-10 25.700 Armadillo/beta-catenin-like repeat HEAT_EZ (PF13513) 55 654 695 0.027 1.300 HEAT-like repeat DUF3361 (PF11841, IPR024574) 154 736 830 0.00013 8.100 Domain of unknown function (DUF3361) Updated: 2019-02-21 Owner: ChiTaRS	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0 NM_001313943.1	1..150 100.0%	- 3	CTNNB1 A0A024R2Q3 A0A2R8Y543 A0A2R8Y5A3 A0A2R8Y5C3 A0A2R8Y5Z1 A0A2R8Y6G0 A0A2R8Y750 A0A2R8Y7Z0 A0A2R8Y804 A0A2R8Y815 A0A2R8YCH5 A0A2R8YG06 B4DGU4 B5BU28 C9IZ65 C9JV16 E7EMJ5 E7EV28 E9PDF9 G9GAG7 P35222 NM_001330729.1	148..552 100.0%	+ 3	1 0 0	exon-exon
2 Homo Sapiens	ChimerDB AU141201 ANNOTATION OF CHIMERA FUSION GenBank ID: AU141201 FASTA Head Gene (1) Alignment: SLC39A6 | OMIM: 608731 Tail Gene (2) Alignment: RHOA | OMIM: 165390 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 25800 18 - 36109067 36109175 1 1 oncogene, protein-coding 387 3 - 49360269 49411968 6 1 oncogene, tumor suppressor, protein-coding 831 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DUF2313 (PF10076, IPR018755) 163 86 187 1.3e-05 11.300 Uncharacterised protein conserved in bacteria (DUF2313) CDC45 (PF02724, IPR003874) 627 110 280 0.00016 6.100 CDC45-like protein Zip (PF02535, IPR003689) 333 393 606 9.1e-46 142.600 ZIP Zinc transporter Updated: 2019-02-20 Owner: ChiTaRS	SLC39A6 K7EQ91 Q13433 XM_011525901.2	1..109 100.0%	- 18	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0 NM_001313943.1	110..785 99.4%	- 3	1 0 0	exon-exon
3 Homo Sapiens	AW189178 ANNOTATION OF CHIMERA FUSION GenBank ID: AW189178 FASTA Head Gene (1) Alignment: RHOA | OMIM: 165390 Tail Gene (2) Alignment: RHOA | OMIM: 165390 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 387 3 - 49360136 49360159 1 1 oncogene, tumor suppressor, protein-coding 387 3 + 49360152 49362525 6 1 oncogene, tumor suppressor, protein-coding 375 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Ras (PF00071, IPR001806, SM00173) 162 135 308 1.1e-61 193.400 Ras family Updated: 2019-02-20 Owner: ChiTaRS	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0 NM_001313943.1	98..121 100.0%	- 3	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0 NM_001313943.1	115..375 99.7%	+ 3	0 2369 72	exon-exon
4 Homo Sapiens	BE836348 ANNOTATION OF CHIMERA FUSION GenBank ID: BE836348 FASTA Head Gene (1) Alignment: RHOA | OMIM: 165390 Tail Gene (2) Alignment: RHOA | OMIM: 165390 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 387 3 + 49360064 49360108 1 1 oncogene, tumor suppressor, protein-coding 387 3 - 49360059 49360156 1 1 oncogene, tumor suppressor, protein-coding 159 hg38 Updated: 2019-04-14 Owner: ChiTaRS	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0 NM_001313941.1	16..60 97.8%	+ 3	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0 NM_001313941.1	52..149 98.0%	- 3	0 2369 72	exon-exon
5 Homo Sapiens	BF996564 ANNOTATION OF CHIMERA FUSION GenBank ID: BF996564 FASTA Head Gene (1) Alignment: RHOA | OMIM: 165390 Tail Gene (2) Alignment: RHOA | OMIM: 165390 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 387 3 - 49359534 49359643 1 1 oncogene, tumor suppressor, protein-coding 387 3 + 49359487 49359581 6 1 oncogene, tumor suppressor, protein-coding 195 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Ras (PF00071, IPR001806, SM00173) 162 135 308 2.3e-61 192.300 Ras family Updated: 2019-02-20 Owner: ChiTaRS	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0 NM_001313943.1	1..108 95.4%	- 3	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0 NM_001313943.1	100..194 97.9%	+ 3	0 575 530	exon-exon
6 Homo Sapiens	BP366322 ANNOTATION OF CHIMERA FUSION GenBank ID: BP366322 FASTA Head Gene (1) Alignment: RHOA | OMIM: 165390 Tail Gene (2) Alignment: FAT3 | OMIM: 612483 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 387 3 - 49359136 49359708 1 0 oncogene, tumor suppressor, protein-coding 120114 11 + 92773301 92773323 2 0 protein-coding 583 hg38 Updated: 2018-06-30 Owner: ChiTaRS	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0	1..573 99.5%	- 3	FAT3 E9PQ73 G5EA25 Q6S4P6 Q8TDW7	554..575 100.0%	+ 11	1 0 0	intron-intron
7 Homo Sapiens	BP366323 ANNOTATION OF CHIMERA FUSION GenBank ID: BP366323 FASTA Head Gene (1) Alignment: RHOA | OMIM: 165390 Tail Gene (2) Alignment: FAT3 | OMIM: 612483 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 387 3 - 49359136 49359708 1 0 oncogene, tumor suppressor, protein-coding 120114 11 + 92773301 92773323 2 0 protein-coding 583 hg38 Updated: 2018-06-30 Owner: ChiTaRS	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0	1..573 99.5%	- 3	FAT3 E9PQ73 G5EA25 Q6S4P6 Q8TDW7	554..575 100.0%	+ 11	1 0 0	intron-intron
8 Homo Sapiens	BQ354371 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ354371 FASTA Head Gene (1) Alignment: RHOA | OMIM: 165390 Tail Gene (2) Alignment: AHNAK2 | OMIM: 608570 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 387 3 + 49360051 49360310 1 1 oncogene, tumor suppressor, protein-coding 113146 14 + 104938029 104938092 7 1 oncogene, protein-coding 327 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Ras (PF00071, IPR001806, SM00173) 162 7 180 3.4e-62 195.000 Ras family Updated: 2019-02-21 Owner: ChiTaRS	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0 NM_001313943.1	10..266 99.7%	+ 3	AHNAK2 Q8IVF2 NM_138420.3	262..322 96.7%	+ 14	1 0 0	exon-exon
9 Homo Sapiens	BQ355255 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ355255 FASTA Head Gene (1) Alignment: RHOA | OMIM: 165390 Tail Gene (2) Alignment: AHNAK2 | OMIM: 608570 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 387 3 + 49360051 49360310 1 1 oncogene, tumor suppressor, protein-coding 113146 14 + 104938029 104938092 7 1 oncogene, protein-coding 327 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Ras (PF00071, IPR001806, SM00173) 162 7 180 3.4e-62 195.000 Ras family Updated: 2019-02-21 Owner: ChiTaRS	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0 NM_001313943.1	10..266 99.7%	+ 3	AHNAK2 Q8IVF2 NM_138420.3	262..322 96.7%	+ 14	1 0 0	exon-exon
10 Homo Sapiens	FN111932 ANNOTATION OF CHIMERA FUSION GenBank ID: FN111932 FASTA Head Gene (1) Alignment: RHOA | OMIM: 165390 Tail Gene (2) Alignment: HS6ST3 | OMIM: 609401 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 387 3 + 49359580 49359637 2 0 oncogene, tumor suppressor, protein-coding 266722 13 + 96174537 96174556 1 0 protein-coding 67 hg38 Updated: 2018-07-22 Owner: ChiTaRS	RHOA A0A024R324 A0A0B6XK12 C9JNR4 C9JRM1 C9JX21 P61586 Q9BVT0	1..57 100.0%	+ 3	HS6ST3 A0A087X0G1 Q8IZP7	39..58 100.0%	+ 13	1 0 0	intron-intron

T O P