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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'RGMA'

Total of fusion sequences: 5 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
XM_011511058.3
1..80
100.0%
-
2

NM_001166288.1
67..87
100.0%
+
15
1
0
0
exon-intron
Homo Sapiens
XR_933210.2
8..272
99.3%
+
16

NM_001166289.1
257..321
100.0%
+
15
1
0
0
intron-exon
Homo Sapiens
NM_001166289.1
1..292
100.0%
+
15

NM_001317778.1
285..386
98.1%
+
8
1
0
0
exon-exon
Homo Sapiens
NM_001166289.1
1..357
100.0%
+
15

NM_001317399.1
352..635
95.8%
+
12
1
0
0
exon-exon
Homo Sapiens
NM_014141.5
1..198
99.5%
-
7

NM_001166289.1
197..662
98.3%
-
15
1
0
0
intron-exon

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