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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'RGL1'

Total of fusion sequences: 11 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

XM_011509339.3
10..29
100.0%
+
1

NM_017582.6
21..399
99.0%
+
1
1
0
0
intron-exon
2
Homo Sapiens

XM_011509339.3
51..99
95.8%
-
1
LOC107985194
XR_001738201.1
84..128
95.6%
-
1
1
0
0
intron-intron
3
Homo Sapiens

NM_002371.3
1..106
100.0%
-
2

XM_011509339.3
106..673
99.9%
+
1
1
0
0
exon-exon
4
Homo Sapiens

NM_003139.3
1..648
100.0%
-
11

XM_011509339.3
553..704
97.2%
-
1
1
0
0
exon-intron
5
Homo Sapiens

NM_001286792.1
3..147
98.0%
-
13

XM_011509339.3
144..267
96.7%
-
1
1
0
0
intron-intron
6
Homo Sapiens
LOC101928414 16..36
100.0%
+
15
21..53
96.7%
+
1
1
0
0
intron-intron
7
Homo Sapiens

NM_001975.2
1..558
99.9%
+
12

NM_001297671.1
557..578
100.0%
-
1
1
0
0
exon-intron
8
Homo Sapiens
BACE2
Q9Y5Z0

NM_012105.4
2..280
97.5%
-
21

XM_011509339.3
266..564
99.7%
-
1
1
0
0
exon-intron
9
Homo Sapiens

XR_001749568.1
1..27
100.0%
+
13

XM_011509339.3
17..121
99.1%
+
1
1
0
0
exon-exon
10
Homo Sapiens

NM_001198799.2
1..184
97.3%
+
10

XM_011509339.3
168..221
97.5%
+
1
1
0
0
intron-intron

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