Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'RBPJ'

Total of fusion sequences: 9 (from 393,531 parsed EST/mRNAs. Last update 2018-11-20)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Homo Sapiens	SplGraphs AU125113 ANNOTATION OF CHIMERA FUSION GenBank ID: AU125113 FASTA Head Gene (1) Alignment: RBPJ | OMIM: 147183 Tail Gene (2) Alignment: GLB1 | OMIM: 611458 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3516 4 + 26435119 26435359 NA NA protein-coding 2720 3 - 33065743 33138610 NA NA oncogene NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to LAG1-DNAbind (PF09271, IPR015351) 152 170 300 1.8e-54 170.700 LAG1, DNA binding BTD (PF09270, IPR015350) 153 301 450 4.5e-78 247.000 Beta-trefoil DNA-binding domain TIG (PF01833, IPR002909) 85 477 566 5.2e-07 16.000 IPT/TIG domain BetaGal_dom4_5 (PF13364, IPR025300) 114 1722 1813 0.053 0.400 Beta-galactosidase jelly roll domain Updated: 2012-12-12 Owner: ChiTaRS	RBPJ A0A024R9Q8 D6R927 D6R946 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RCM1 D6RE93 D6REC2 D6REP3 D6RF98 D6RIV8 D6RIZ8 H0Y8R3 L8E7S3 Q06330 Q14663	38..278 99.2%	+ 4	GLB1 C9J4G9 C9J539 C9JF15 C9JWX1 E7EQ29 F4YK10 F8WEN1 F8WF40 P16278	278..794 99.3%	- 3	1 0 0
Homo Sapiens	FN103232 ANNOTATION OF CHIMERA FUSION GenBank ID: FN103232 FASTA Head Gene (1) Alignment: ANKRD52 Tail Gene (2) Alignment: RBPJ | OMIM: 147183 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 283373 12 - 56242055 56242512 2 0 protein-coding 3516 4 + 26430011 26430468 5 0 protein-coding 100 hg38 Updated: 2018-07-22 Owner: ChiTaRS	ANKRD52 L8EAS5 Q8NB46	1..25 100.0%	- 12	RBPJ A0A024R9Q8 D6R927 D6R946 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RCM1 D6RE93 D6REC2 D6REP3 D6RF98 D6RIV8 D6RIZ8 H0Y8R3 L8E7S3 Q06330 Q14663	6..96 95.7%	+ 4	1 0 0
Homo Sapiens	BM994447 ANNOTATION OF CHIMERA FUSION GenBank ID: BM994447 FASTA Head Gene (1) Alignment: RBPJ | OMIM: 147183 Tail Gene (2) Alignment: RBPJ | OMIM: 147183 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3516 4 - 26432443 26432824 NA NA protein-coding 3516 4 + 26432364 26432458 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to LAG1-DNAbind (PF09271, IPR015351) 152 48 178 4.3e-55 172.700 LAG1, DNA binding BTD (PF09270, IPR015350) 153 179 328 1e-78 249.000 Beta-trefoil DNA-binding domain TIG (PF01833, IPR002909) 85 355 444 1.4e-07 17.800 IPT/TIG domain RHD_dimer (PF16179, IPR032397) 103 630 662 2.2e-05 10.800 Rel homology dimerisation domain Updated: 2012-12-12 Owner: ChiTaRS	RBPJ A0A024R9Q8 D6R927 D6R946 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RCM1 D6RE93 D6REC2 D6REP3 D6RF98 D6RIV8 D6RIZ8 H0Y8R3 L8E7S3 Q06330 Q14663	1..381 100.0%	- 4	RBPJ A0A024R9Q8 D6R927 D6R946 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RCM1 D6RE93 D6REC2 D6REP3 D6RF98 D6RIV8 D6RIZ8 H0Y8R3 L8E7S3 Q06330 Q14663	378..472 100.0%	+ 4	1 0 0
Homo Sapiens	BF997054 ANNOTATION OF CHIMERA FUSION GenBank ID: BF997054 FASTA Head Gene (1) Alignment: CD59 | OMIM: 107271 Tail Gene (2) Alignment: RBPJ | OMIM: 147183 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 966 11 + 33731854 33743973 NA NA protein-coding 3516 4 + 26432077 26432537 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to TIG (PF01833, IPR002909) 85 127 198 1.4e-07 17.900 IPT/TIG domain Updated: 2012-12-12 Owner: ChiTaRS	CD59 E9PI80 E9PNW4 E9PR17 H0YET2 P13987 Q6FHM9	1..187 100.0%	+ 11	RBPJ A0A024R9Q8 D6R927 D6R946 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RCM1 D6RE93 D6REC2 D6REP3 D6RF98 D6RIV8 D6RIZ8 H0Y8R3 L8E7S3 Q06330 Q14663	178..469 99.7%	+ 4	1 0 0
Homo Sapiens	BG272726 ANNOTATION OF CHIMERA FUSION GenBank ID: BG272726 FASTA Head Gene (1) Alignment: RBPJ | OMIM: 147183 Tail Gene (2) Alignment: UBE2E1 | OMIM: 602916 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3516 4 + 26326323 26326342 1 0 protein-coding 7324 3 - 23891032 23891313 1 0 protein-coding 295 hg38 Updated: 2018-07-30 Owner: ChiTaRS	RBPJ A0A024R9Q8 D6R927 D6R946 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RCM1 D6RE93 D6REC2 D6REP3 D6RF98 D6RIV8 D6RIZ8 H0Y8R3 L8E7S3 Q06330 Q14663	1..20 100.0%	+ 4	UBE2E1 A0A024R2K3 B7Z306 C9J2P0 H7C061 P51965	14..295 100.0%	- 3	1 0 0
Homo Sapiens	BG983944 ANNOTATION OF CHIMERA FUSION GenBank ID: BG983944 FASTA Head Gene (1) Alignment: RBPJ | OMIM: 147183 Tail Gene (2) Alignment: FRYL Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3516 4 - 26366082 26366172 NA NA protein-coding 285527 4 - 48499769 48500061 NA NA oncogene NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	RBPJ A0A024R9Q8 D6R927 D6R946 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RCM1 D6RE93 D6REC2 D6REP3 D6RF98 D6RIV8 D6RIZ8 H0Y8R3 L8E7S3 Q06330 Q14663	14..104 97.9%	- 4	FRYL A0A286YEZ9 A0A2C9F2R7 D6R9B9 D6RJI4 F2Z2S2 H0Y9X0 O94915	96..388 100.0%	- 4	1 0 0
Homo Sapiens	BI495455 ANNOTATION OF CHIMERA FUSION GenBank ID: BI495455 FASTA Head Gene (1) Alignment: RBPJ | OMIM: 147183 Tail Gene (2) Alignment: DIRC3 | OMIM: 608262 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3516 4 - 26191191 26191260 2 0 protein-coding 729582 2 + 217617340 217617391 3 0 oncogene 73 hg38 Updated: 2018-11-03 Owner: ChiTaRS	RBPJ A0A024R9Q8 D6R927 D6R946 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RCM1 D6RE93 D6REC2 D6REP3 D6RF98 D6RIV8 D6RIZ8 H0Y8R3 L8E7S3 Q06330 Q14663	1..68 95.6%	- 4	DIRC3 C9JPN6	21..72 96.0%	+ 2	1 0 0
Homo Sapiens	AA644218 ANNOTATION OF CHIMERA FUSION GenBank ID: AA644218 FASTA Head Gene (1) Alignment: RBPJ | OMIM: 147183 Tail Gene (2) Alignment: KIF5B | OMIM: 602809 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3516 4 - 26356834 26357102 NA NA protein-coding 3799 10 - 32298393 32298501 NA NA protein-coding NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	RBPJ A0A024R9Q8 D6R927 D6R946 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RCM1 D6RE93 D6REC2 D6REP3 D6RF98 D6RIV8 D6RIZ8 H0Y8R3 L8E7S3 Q06330 Q14663	8..276 96.3%	- 4	KIF5B D3DRX6 P33176 Q2TA90 Q66K46 Q6P164 V9HW29	269..377 100.0%	- 10	1 0 0
Homo Sapiens	FN146540 ANNOTATION OF CHIMERA FUSION GenBank ID: FN146540 FASTA Head Gene (1) Alignment: BAIAP2L1 | OMIM: 611877 Tail Gene (2) Alignment: RBPJ | OMIM: 147183 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 55971 7 - 98355238 98355462 2 0 protein-coding 3516 4 + 26321611 26321633 1 0 protein-coding 106 hg38 Updated: 2018-08-09 Owner: ChiTaRS	BAIAP2L1 Q9UHR4	1..26 100.0%	- 7	RBPJ A0A024R9Q8 D6R927 D6R946 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RCM1 D6RE93 D6REC2 D6REP3 D6RF98 D6RIV8 D6RIZ8 H0Y8R3 L8E7S3 Q06330 Q14663	13..35 100.0%	+ 4	1 0 0