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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'RARB'

Total of fusion sequences: 21 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
11
Homo Sapiens

NM_001290216.2
3..28
96.2%
-
3

XM_017007324.1
9..333
99.7%
-
3
1
0
0
intron-exon
12
Homo Sapiens

NM_054027.5
2..345
99.2%
-
5

NM_001290216.2
330..359
100.0%
+
3
1
0
0
exon-intron
13
Mus musculus

NM_001289760.1
44..368
95.7%
-
14

XM_006520101.2
53..442
95.7%
-
15
1
0
0
intron-intron
14
Mus musculus

NM_133738.1
1..219
95.5%
+
5

NM_001289760.1
27..361
95.0%
+
14
1
0
0
intron-intron
15
Homo Sapiens

NM_001290216.2
1..26
100.0%
+
3
MALSU1
Q96EH3

NM_138446.1
10..67
98.3%
-
7
1
0
0
intron-intron
16
Homo Sapiens

NM_001290216.2
4..26
100.0%
-
3

NM_001204425.1
24..374
99.8%
-
13
1
0
0
intron-exon
17
Mus musculus

NM_010594.2
38..656
97.2%
-
6

NM_001289760.1
657..680
100.0%
+
14
1
0
0
exon-intron
18
Homo Sapiens

NM_001290216.2
104..470
97.4%
-
3

XR_001753170.2
420..477
98.3%
-
18
1
0
0
intron-intron
19
Mus musculus

NM_001289760.1
105..155
96.1%
-
14

XM_011244061.2
122..627
100.0%
+
12
1
0
0
intron-intron
20
Homo Sapiens

NM_001290216.2
8..33
100.0%
+
3

NM_004279.2
26..428
99.3%
-
7
0
0
0
intron-exon

T o p