Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'RARB'

Total of fusion sequences: 14 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_001290216.2
1..7
98.2%
+
3

NM_001068.3
8..453
98.2%
+
3
2
186
5
exon-exon
2
Homo Sapiens

NM_001290216.2
1..10
99.0%
+
3

NM_001068.3
11..502
99.0%
+
3
2
186
5
exon-exon
3
Homo Sapiens

NM_001068.3
1..22
97.7%
-
3

NM_001290216.2
23..84
97.7%
-
3
0
65535
4385
intron-intron
4
Homo Sapiens

NM_001290216.2
4..30
100.0%
-
3

NM_001317771.1
23..325
100.0%
+
8
1
0
0
intron-exon
5
Homo Sapiens

NM_001317771.1
9..311
100.0%
-
8

NM_001290216.2
304..330
100.0%
+
3
1
0
0
exon-intron
6
Homo Sapiens

NM_001290216.2
2..29
100.0%
+
3

NR_135229.1
9..405
96.9%
+
3
1
0
0
intron-exon
7
Homo Sapiens

NM_001290216.2
12..39
100.0%
-
3

XM_017017145.1
30..531
100.0%
+
11
1
0
0
intron-exon
8
Homo Sapiens

NM_001290216.2
1..25
100.0%
+
3
YBX1P10 9..341
98.5%
+
9
1
0
0
intron-exon
9
Homo Sapiens

NM_001290216.2
3..28
96.2%
-
3

XM_017007324.1
9..333
99.7%
-
3
1
0
0
intron-exon
10
Homo Sapiens

NM_054027.5
2..345
99.2%
-
5

NM_001290216.2
330..359
100.0%
+
3
1
0
0
exon-intron

T o p