Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'RAP2A'

Total of fusion sequences: 4 (from 1,350,599 parsed EST/mRNAs. Last update 2019-06-16)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Homo Sapiens	FN093204 ANNOTATION OF CHIMERA FUSION GenBank ID: FN093204 FASTA Head Gene (1) Alignment: TRPS1 | OMIM: 604386 Tail Gene (2) Alignment: RAP2A | OMIM: 179540 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7227 8 + 115537353 115537447 3 0 oncogene, protein-coding 5911 13 - 97467400 97467420 1 0 oncogene 108 hg38 Updated: 2018-09-07 Owner: ChiTaRS	TRPS1 A0A1D5RMP4 C9J6L7 E5RFF3 E5RJ97 E7EVN4 F8W8T0 H0YAV4 H0YC29 Q9UHF7	3..95 100.0%	+ 8	RAP2A F6U784 P10114	86..106 100.0%	- 13	1 0 0
Homo Sapiens	AF339797 ANNOTATION OF CHIMERA FUSION GenBank ID: AF339797 FASTA Head Gene (1) Alignment: RAP2A | OMIM: 179540 Tail Gene (2) Alignment: CAMK1D | OMIM: 607957 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5911 13 + 97468402 97469059 1 0 oncogene 57118 10 + 12790816 12791013 2 0 protein-coding 684 hg38 Updated: 2018-10-25 Owner: ChiTaRS	RAP2A F6U784 P10114	12..669 99.9%	+ 13	CAMK1D A0A087WUR6 Q5SQQ7 Q8IU85	656..684 100.0%	+ 10	1 0 0
Homo Sapiens	BE178971 ANNOTATION OF CHIMERA FUSION GenBank ID: BE178971 FASTA Head Gene (1) Alignment: RAP2A | OMIM: 179540 Tail Gene (2) Alignment: AFTPH Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5911 13 - 98117919 98118212 NA NA oncogene 54812 2 - 64819389 64819583 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Ras (PF00071, IPR001806, SM00173) 162 88 249 1.9e-59 186.100 Ras family Updated: 2012-12-12 Owner: ChiTaRS	RAP2A F6U784 P10114	2..293 99.0%	- 13	AFTPH A0A0A0MSN6 A0A0U1RR74 B8ZZI9 Q3LIF3 Q6ULP2	283..477 98.5%	- 2	1 0 0
Homo Sapiens	AV682549 ANNOTATION OF CHIMERA FUSION GenBank ID: AV682549 FASTA Head Gene (1) Alignment: RAP2A | OMIM: 179540 Tail Gene (2) Alignment: ESCO1 | OMIM: 609674 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5911 13 + 97466240 97466591 1 0 oncogene 114799 18 + 21531894 21531917 1 0 protein-coding 397 hg38 Updated: 2016-12-09 Owner: ChiTaRS	RAP2A F6U784 P10114	1..352 100.0%	+ 13	ESCO1 A0A024RC19 A0A0C4DH04 Q5FWF5	353..376 100.0%	+ 18	1 0 0