Result for the search of Gene Name/NCBI ID(s): 'RAP2A'

Total of fusion sequences: 4 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	BE178971 ANNOTATION OF CHIMERA FUSION GenBank ID: BE178971 FASTA Head Gene (1) Alignment: RAP2A | OMIM: 179540 Tail Gene (2) Alignment: LOC105374772 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5911 13 - 97465665 97465958 2 1 oncogene 105374772 2 - 64592255 64592449 3 0 ncRNA 477 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Ras (PF00071, IPR001806, SM00173) 162 88 249 1.9e-59 186.100 Ras family Updated: 2019-02-20 Owner: ChiTaRS	RAP2A F6U784 P10114 NM_021033.6	2..293 99.0%	- 13	LOC105374772 XR_940170.2	283..477 98.5%	- 2	1 0 0	exon-intron
2 Homo Sapiens	FN093204 ANNOTATION OF CHIMERA FUSION GenBank ID: FN093204 FASTA Head Gene (1) Alignment: TRPS1 | OMIM: 604386 Tail Gene (2) Alignment: RAP2A | OMIM: 179540 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7227 8 + 115537353 115537447 2 0 oncogene, protein-coding 5911 13 - 97467400 97467420 1 1 oncogene 108 hg38 Updated: 2019-02-08 Owner: ChiTaRS	TRPS1 A0A1D5RMP4 C9J6L7 E5RFF3 E5RJ97 E7EVN4 F8W8T0 H0YAV4 H0YC29 Q9UHF7 XM_011517264.2	3..95 100.0%	+ 8	RAP2A F6U784 P10114 NM_021033.6	86..106 100.0%	- 13	1 0 0	intron-exon
3 Homo Sapiens	EC573762 ANNOTATION OF CHIMERA FUSION GenBank ID: EC573762 FASTA Head Gene (1) Alignment: RAP2A | OMIM: 179540 Tail Gene (2) Alignment: SKAP2 | OMIM: 605215 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5911 13 - 97442165 97442344 0 0 oncogene 8935 7 - 26669158 26669253 1 1 protein-coding 118 hg38 Updated: 2019-03-27 Owner: ChiTaRS	RAP2A F6U784 P10114 NM_021033.6	1..32 96.7%	- 13	SKAP2 B7Z5R3 C9JQ17 O75563 NM_003930.4	23..118 97.9%	- 7	1 0 0	intron-exon
4 Homo Sapiens	AV682549 ANNOTATION OF CHIMERA FUSION GenBank ID: AV682549 FASTA Head Gene (1) Alignment: RAP2A | OMIM: 179540 Tail Gene (2) Alignment: EIF2B2 | OMIM: 606454 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5911 13 + 97466240 97466591 2 1 oncogene 8892 14 - 75004689 75004716 5 0 protein-coding 397 hg38 Updated: 2019-02-01 Owner: ChiTaRS	RAP2A F6U784 P10114 NM_021033.6	1..352 100.0%	+ 13	EIF2B2 G3V5E5 H0YJJ8 H0YK01 P49770 Q53XC2 Q9BPX4 NM_014239.3	349..376 100.0%	- 14	1 0 0	exon-intron

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