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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'RAF1'

Total of fusion sequences: 13 (from 2,403,910 parsed EST/mRNAs. Last update 2020-02-09 10:24:42)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_145040.2
1..569
99.9%
-
11

NR_148940.1
567..2587
100.0%
-
3
1
0
0
exon-exon
2
Homo Sapiens
SplGraphs
NR_148940.1
1..244
100.0%
-
3

NM_001024593.1
240..407
100.0%
-
10
2
36
109
intron-exon
3
Homo Sapiens

XM_011534296.2
1..1641
100.0%
-
3

NR_148940.1
1640..3503
100.0%
-
3
1
0
0
exon-exonBREAKPOINTs
19363522
19373855
4
Homo Sapiens

NM_017697.3
1..2003
100.0%
+
8

NR_148940.1
2002..4282
100.0%
-
3
1
0
0
exon-exonBREAKPOINTs
20526349
5
Homo Sapiens

NR_148940.1
35..314
100.0%
-
3

NM_001024593.1
310..586
99.7%
-
10
2
36
109
intron-exon
6
Homo Sapiens

NM_145659.3
1..22
100.0%
-
16

NR_148940.1
11..366
100.0%
-
3
1
0
0
intron-intron
7
Homo Sapiens

NM_145659.3
1..23
100.0%
-
16

NR_148940.1
12..248
100.0%
-
3
1
0
0
intron-intron
8
Homo Sapiens

XR_001736904.2
6..332
98.8%
+
1

XM_017006966.1
316..342
100.0%
+
3
1
0
0
exon-exon
9
Homo Sapiens

NR_148940.1
8..569
100.0%
-
3
CDC5L
Q99459

NM_001253.3
563..593
100.0%
-
6
1
0
0
exon-intron
10
Homo Sapiens

NR_148940.1
43..131
98.5%
-
3

NM_133625.4
132..240
98.5%
-
3
1
0
0
intron-intron

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