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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'RAF1'

Total of fusion sequences: 14 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
NM_145040.2
1..569
99.9%
-
11

NR_148940.1
567..2587
100.0%
-
3
1
0
0
exon-exon
Homo SapiensSplGraphs
NR_148940.1
1..244
100.0%
-
3

NM_001024593.1
240..407
100.0%
-
10
2
36
109
intron-exon
Homo Sapiens
XM_011534296.2
1..1641
100.0%
-
3

NR_148940.1
1640..3503
100.0%
-
3
1
0
0
exon-exonBREAKPOINTs
19363522
19373855
Homo Sapiens
NM_017697.3
1..2003
100.0%
+
8

NR_148940.1
2002..4282
100.0%
-
3
1
0
0
exon-exonBREAKPOINTs
20526349
Homo Sapiens
NR_148940.1
35..314
100.0%
-
3

NM_001024593.1
310..586
99.7%
-
10
2
36
109
intron-exon
Homo Sapiens
XR_001736904.2
6..332
98.8%
+
1

XM_017006966.1
316..342
100.0%
+
3
1
0
0
exon-exon
Homo Sapiens
NR_148940.1
8..569
100.0%
-
3
CDC5L
Q99459

NM_001253.3
563..593
100.0%
-
6
1
0
0
exon-intron
Homo Sapiens
NR_148940.1
43..131
98.5%
-
3

NM_133625.4
132..240
98.5%
-
3
1
0
0
intron-intron
Homo Sapiens
ENST00000422087
1..28
100.0%
+
7

XM_011533974.3
9..473
99.4%
+
3
1
0
0
intron-exon
Homo Sapiens
NM_145659.3
1..23
100.0%
-
16

NR_148940.1
12..248
100.0%
-
3
1
0
0
intron-intron

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