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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'RAD54B'

Total of fusion sequences: 9 (from 2,544,974 parsed EST/mRNAs. Last update 2020-03-27 15:38:11)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_012415.3
20..50
100.0%
-
8

NM_030583.3
39..474
97.1%
-
8
1
0
0
intron-exonBREAKPOINTs
25500544
2
Homo Sapiens
RP11-469A15.2 3..316
99.4%
+
1

NM_012415.3
299..330
100.0%
+
8
2
0
259
intron-intron
3
Homo Sapiens
RP11-469A15.2 11..584
99.9%
+
1

NM_012415.3
567..598
100.0%
+
8
2
0
259
intron-intron
4
Homo Sapiens

NM_012415.3
4..265
98.9%
+
8

XR_428077.1
266..391
99.3%
-
7
2
0
20
exon-exon
5
Homo Sapiens

NM_012415.3
15..252
99.6%
+
8

XR_428077.1
253..378
100.0%
-
7
2
0
20
exon-exon
6
Homo Sapiens
LOC105379315
XR_949569.3
8..394
99.3%
-
8

NM_012415.3
135..400
95.8%
+
8
1
0
0
intron-intron
7
Homo Sapiens

NM_012415.3
36..62
100.0%
-
8

XM_011523738.2
44..107
100.0%
-
17
1
0
0
intron-intron
8
Homo Sapiens

NM_001205263.1
80..279
96.5%
+
8

NM_021930.5
243..303
95.9%
+
7
1
0
0
intron-intron
9
Homo Sapiens
1..25
96.0%
+
1
8..48
100.0%
-
8
1
0
0
intron-intron

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