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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Ptprn2'

Total of fusion sequences: 8 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
Gm7931
XR_868409.2
1..1332
97.5%
+
5

NM_011215.2
51..1344
97.6%
-
12
1
0
0
exon-intron
2
Mus musculus
Gm7931
XR_868409.2
1..1328
97.6%
+
5

NM_011215.2
20..1340
97.7%
-
12
1
0
0
exon-intron
3
Mus musculus

NM_016957.3
47..823
99.4%
-
4

NM_011215.2
69..844
98.7%
-
12
1
0
0
exon-intron
4
Mus musculus
Neat1
NR_003513.3
4..180
99.5%
-
19

NM_011215.2
181..236
96.5%
+
12
1
0
0
exon-intron
5
Mus musculus

ENSMUST00000112736
1..3034
100.0%
-
1

NM_011215.2
3013..3043
96.2%
+
12
1
0
0
intron-intron
6
Mus musculus

NM_011215.2
6..28
100.0%
-
12

XM_006499658.3
22..299
95.0%
+
2
1
0
0
intron-exon
7
Mus musculus

NM_011215.2
1..259
95.0%
+
12

NM_001163496.1
18..652
100.0%
-
3
1
0
0
intron-exon
8
Mus musculus

NM_001271415.1
1..551
99.0%
+
6

NM_011215.2
552..596
97.7%
+
12
1
0
0
exon-intron

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